Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0252 ATGATGTCTCTGCAGCTTCTTCTGTTAGCTTTTGTCCTTCTCGCCTCATCAGCCTTCATTCTCTCTAAGAGAAGAAACAAATCATCAAAGCCCAGGCTGAGTCTTCCTCCGAGCCCACGGGCATTACCTATAATCGGCCACCTTCACCTCCTCAGTCCTCTGGTTCACCAAGCCTTTCGGGACCTATCTGCTAAATATGGGCCTCTCATCCACCTTAAACTTGGCTATGCTACGTTGGTTGTGGCTAACACTCCAGAGCTCGCAAAAGAGCTTCTCAAGACCAACGAGCTAGCTTACTCTTCCCGTAAAATGAATATGGCCATCAACCTGGTTACCTACGACAACGCTACCTTTGCCTTTGCCCCTTACGACACTTACTGGAAATTCATCAAAAAGCTCAGCACCACCGAGCTCTTGGGTGCCCGAACCATTAAACAGTTCCAACCGGTTCGGACCAGGGAGCTCCGCGAGTTCGTTAAGGGTCTGATGGATAAATCGGAGGCCCGAGAGAGCGTGAACCTCACCCAAGAACTTTTGAAGTTTTCTAACAACATCATCTCCCAGATGATGTTGAGCATCAAGAGCTCTGGAACAGATGGCCAAGCAGAGCAGGCCAGGAATTTGGTGCGGGAAGTGACGGAGATTTTTGGGGAATTTAATGCCTCGGATTTCATTAAAATCTTCAAGGGCTTGGACTTGCAGGGTTTCAAAAAGAGAGCCATGGACATACACAAGAGGTATGATGCTCTGCTGGAGAAAATTATCTCTGATCGCGAGAAACTTCGAAGCCAACGAAAGGCTAACAAAGCCGGCCATGCTGAGGATGGAGAAGAAAAAATTAGGGACTTTCTTGACATTTTGCTCGACGTTGCTGAGGACGAGAGTTCCGAGGTCGACTTAACTAGGAATCATATCAAATCATTGATTTTGGATTACTTCACAGCAGCCACAGATACAACGGCGATCTCAGTGGAATGGACAATTTCAGAGCTGGTAAATAACCCAAGAGTGCTGAAGAAAGCACAAGAGGAGGTAGACAGAGTGACAGAGAGCCAGAGATTGATATGCGAAGCAGATATTCCAAACCTACCTTATATCAACGCCATAATAAAGGAAACAATGAGGCTTCACCCACCCATTACTATGATAACCAGGAAGGGTATCCAAGACTGTGTGGTGGATGGTTACTCAATCCCGAAGGGCACAATCCTGTGCGTAAACATTTGGGCTATGGGAAGGGACCCAAACATTTGGGAAAACCCACTAGAGTTCAGACCAGAGAGGTTCCTTGAAGGCAAAGAGAGTGGTTTGGATATCAAAGGGCATCACTATGAGTTGTTGCCTTTTGGTTCAGGAAGAAGAGGTTGCCCTGGCCAGCCTTTGGCTATGCAAGAATTGCCCACCGTGATTGGAGCTCTGGCTCAGTGCTTCTCGTGGAAGGCTCTGGATTCACAAGGTAAGATAATCGGTGATGGCCAAAAAATCGACATGGATGAACGGCCAGGGTTGACTGCTCCTAGAGCTAATGATCTTGTCTGTATACCTGTAGCGCGATTGAATCCCACTTCTTTCCTTGAAGTCTGA 1584 0.4729 MMSLQLLLLAFVLLASSAFILSKRRNKSSKPRLSLPPSPRALPIIGHLHLLSPLVHQAFRDLSAKYGPLIHLKLGYATLVVANTPELAKELLKTNELAYSSRKMNMAINLVTYDNATFAFAPYDTYWKFIKKLSTTELLGARTIKQFQPVRTRELREFVKGLMDKSEARESVNLTQELLKFSNNIISQMMLSIKSSGTDGQAEQARNLVREVTEIFGEFNASDFIKIFKGLDLQGFKKRAMDIHKRYDALLEKIISDREKLRSQRKANKAGHAEDGEEKIRDFLDILLDVAEDESSEVDLTRNHIKSLILDYFTAATDTTAISVEWTISELVNNPRVLKKAQEEVDRVTESQRLICEADIPNLPYINAIIKETMRLHPPITMITRKGIQDCVVDGYSIPKGTILCVNIWAMGRDPNIWENPLEFRPERFLEGKESGLDIKGHHYELLPFGSGRRGCPGQPLAMQELPTVIGALAQCFSWKALDSQGKIIGDGQKIDMDERPGLTAPRANDLVCIPVARLNPTSFLEV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0252 527 CDD CYP93 67 515 - -
Glsi04g0252 527 SUPERFAMILY Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Glsi04g0252 527 PANTHER STEROID 21-HYDROXYLASE-RELATED 11 512 - -
Glsi04g0252 527 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0252 527 FunFam Cytochrome P450 family protein 27 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0252 Glsi-ChrGlsi04 1602589 1604455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0252 30 524 Cytochrome P450 AT5G06900 41.449 3.00e-144 423