Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0241 ATGCCGATTTCTAGAATTGCCATAGGAAATGCATCGGAATTCCGTCAAGCCGATGCTCTCAAGGCTGCCCTGGCCGAGTTCATTTCAATGCTCATATTTGTCTTTGCTGGGGAAGGCTCGGGCATGGCTTATAACAAGCTGACAGACAATGGTGCAGCAACACCAGCTGGGCTAGTGGCAGCATCACTGGCTCATGCCTTTGCACTGTTTGTGGCGGTATCTGTTGGTGCTAACATTTCGGGTGGGCATGTCAATCCCGCTGTTACATTTGGTGCCTTTGTTGGTGGCCACATCTCCCTCCTCAGAAGCATTTTGTATTGGATCGCCCAATTGCTTGGTTCTGTGGTTGCTTGCTTGCTCCTTAAATTTGCCACAGGTGGACTGGAAACATCTGCATTCGCGCTGTCTTCAGGAGTGGGTGCATGGAACGCAGTTGTGTTTGAGATTGTAATGACTTTTGGTTTAGTTTACACAGTGTATGCAACTGCCGTGGACCCAAAGAAGGGTGACATTGGAACAATTGCTCCAATAGCAATTGGTTTCATTGTGGGTGCTAACATCTTGGCCGGTGGTGCCTTTGACGGTGCATCCATGAACCCAGCTGTCTCTTTCGGACCCGCCGTTGTTAGCTGGACATGGGATAACCACTGGGTCTACTGGCTCGGTCCATTCATTGGTTCTGCCATTGCTGCCATCGTCTACGAGATATTCTTCATCAGCAATACCCATGAACAGCTGCCCACCACAGATTATTAG 756 0.4947 MPISRIAIGNASEFRQADALKAALAEFISMLIFVFAGEGSGMAYNKLTDNGAATPAGLVAASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHISLLRSILYWIAQLLGSVVACLLLKFATGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFIGSAIAAIVYEIFFISNTHEQLPTTDY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0241 251 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Glsi04g0241 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 SUPERFAMILY Aquaporin-like 14 247 IPR023271 -
Glsi04g0241 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Glsi04g0241 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Glsi04g0241 251 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi04g0241 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0241 Glsi-ChrGlsi04 1533570 1534996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0241 1 251 Major Intrinsic Protein MIP AT2G36830 80.080 7.00e-145 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1796 14 18288629 18289573 Glsi04g0241 04 1533570 1534996 CCT