Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0234 ATGCGGGAATATTTTTCACCAACAAAAGTAGAAACAAATGATTCTTTTCCAAACAAGAAACAAGCAGTGGAGGATGCTAATGGAAAATCAAGTTCAGGAATTTCAATTGCTAATTTTACACCTTGGGAAAGCAATCCTACTTTGCATTCAGTTCCAGACCAATTCATTGGCCGATTATTTGGACCCAAAAATAGGTCTGTCAATTTCGCTGAAAAGAATACTTCTTTTTCTGTGGTTGATGATTCTAATTTGAGAAAAAAGATTATTTATGGAGAAGATTCATCTTTTGGCTTGCCTATATCTCAAATTAAAAAAGTCAAAGTAGATCAGGTTAAAGATTGTGATAGTGCACAAGCTTCAGAGGGACATAACTTTAACAGACAGAATATCAGTGATCTACATCAGGCCTATAACAGGGAAGTTGAGGCAATGGGGCAAGCCTTTGATAAGGAGGGTGGTGTCACATTAATGGGACACACTTACAACAGAGGGGATGCACGTGTTAGATCATTGGATGGCCCCCGTTGCAAAGGAGATGAGAATGTCATATCTGTTGGTGATTCCTTTAGTAAAGTTCAAGTATCAACAGCAGCTCATGAAAAAGAGTTGAATGTGTCAAATTCCAATGCAGCAAGGAAAGAAGCTTCAAACAGCCTTCCTTCTAATGTCAGAAGCTTGATTTCTACTGGTATGCTTGATGGAGTTCTTGTTAATTATGGTCATGTTCCTGCGTGGATGAAGGAACTCCGTGGAATTATTAAAGGTTCTGGCTATCTTTGTGGGTGTCAGTCGTGTGATTATGCCAAGGTTCTAAATGCTTTTGAGTTTGAGAGACATGCTGGTTGCAAAACAAAACATCCGAACAATCACATGTACTTTGAGAACGGGAAGACCATTTATCAGATAGTACAGGAGTTGAGGAGTACTCGTGAAAGATTGTTGTCCGATACAATTCAAACAGTTTTCGGTGAACCAATTAATCAGAAAGCATTTTGCATTTGGAAGGGTGAAATTCACCCGATTGCTGTGACAGTTCCTCCTATTTGGGCAGAAGATCTGGAAAAAAGAGAGACGGATCAGTTGTTGGCAAGAGTGGGGGAGTGGGGATGGGTGTGGTCGCTTCTGCAGTTGACTGGATGTCTGGTTATTTACTGGTTTCAGTTTCAATCTGTTTTTCAGAACTCTGCCTCTCTGGATACTAATGGGTATCATTGA 1215 0.3992 MREYFSPTKVETNDSFPNKKQAVEDANGKSSSGISIANFTPWESNPTLHSVPDQFIGRLFGPKNRSVNFAEKNTSFSVVDDSNLRKKIIYGEDSSFGLPISQIKKVKVDQVKDCDSAQASEGHNFNRQNISDLHQAYNREVEAMGQAFDKEGGVTLMGHTYNRGDARVRSLDGPRCKGDENVISVGDSFSKVQVSTAAHEKELNVSNSNAARKEASNSLPSNVRSLISTGMLDGVLVNYGHVPAWMKELRGIIKGSGYLCGCQSCDYAKVLNAFEFERHAGCKTKHPNNHMYFENGKTIYQIVQELRSTRERLLSDTIQTVFGEPINQKAFCIWKGEIHPIAVTVPPIWAEDLEKRETDQLLARVGEWGWVWSLLQLTGCLVIYWFQFQSVFQNSASLDTNGYH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0234 404 PANTHER AUTOIMMUNE REGULATOR 11 332 - -
Glsi04g0234 404 MobiDBLite consensus disorder prediction 1 31 - -
Glsi04g0234 404 Pfam Tify domain binding domain 251 306 IPR032308 -
Glsi04g0234 404 MobiDBLite consensus disorder prediction 8 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0234 Glsi-ChrGlsi04 1487953 1491995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0234 212 336 PHD Transcription Factor Family AT3G53680 50.400 2.10e-35 136