Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0217 ATGGCTTCGTCTTCCTTAAGCTCCTCTTTCTTACTGGCTACAGCGTCATTCCTTATCCTTAGCACTCTCTCCACAGCTACACCCCCCGGCGTCATCTTAACGCTCGTAAACAACTGTAACTTCCCCGTCTGGCCCGCCATCCAGCCTAACGCCGGTCACCCAGTCCTCGCTCGTGGCGGCTTTTTCCTCCACTCGCTCACCCACCTCTCCATCCCCGTCCCGGACAGCCATTGGTCGGGTCGGGTCTGGGCCCGAACCGGCTGTAGCTACTCTAACAAACAGTTCTTTTGCGCAACCGGTGACTGCGGTGGTCGCCTGGAGTGCAACGGCGCCGGTGGTGCTCCCCCAGCCACTCTGGCCCAGTTCAGCATCCACCATGGCGCCAACGACTTCTCCTCCTACGGCGTTAGCCTTGTGGATGGATTTAACGTCCCCATGACGGTAACCCCACACGAAGGTAAAGGGGTGTGCCCGGTGGTGGGTTGTCGCACCGATCTGCTTGCCACGTGTCCCCCCGCGTTGCAGCACCGTTCACCGGCGGGTCATGGACCAGTAGTGGCGTGTAAGAGTGGGTGCGAGGCTTTACGCACGGACGAGCTGTGCTGTAGAAACCATTACAATAGCCCACAAGCTTGTAAGCCTTCTACCTACTCTCAGTTCTTCAAGCATGCGTGCCCTGCTACGTCCACCTTCGCCCATGACAGCCCTTCTCTTATGCACGAGTGTTCCTCGCCACGTGAACTCAAGGTCATCTTTTGCCATTGA 765 0.5817 MASSSLSSSFLLATASFLILSTLSTATPPGVILTLVNNCNFPVWPAIQPNAGHPVLARGGFFLHSLTHLSIPVPDSHWSGRVWARTGCSYSNKQFFCATGDCGGRLECNGAGGAPPATLAQFSIHHGANDFSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRTDLLATCPPALQHRSPAGHGPVVACKSGCEALRTDELCCRNHYNSPQACKPSTYSQFFKHACPATSTFAHDSPSLMHECSSPRELKVIFCH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0217 254 CDD TLP-PA 32 253 - -
Glsi04g0217 254 SUPERFAMILY Osmotin, thaumatin-like protein 32 253 IPR037176 -
Glsi04g0217 254 PIRSF PR5 1 254 IPR001938 -
Glsi04g0217 254 FunFam Osmotin-like protein 32 253 - -
Glsi04g0217 254 ProSiteProfiles Thaumatin family profile. 30 254 IPR001938 -
Glsi04g0217 254 SMART tha2 33 254 IPR001938 -
Glsi04g0217 254 PRINTS Pathogenesis-related protein signature 244 253 IPR001938 -
Glsi04g0217 254 PRINTS Pathogenesis-related protein signature 93 122 IPR001938 -
Glsi04g0217 254 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Glsi04g0217 254 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Glsi04g0217 254 Pfam Thaumatin family 37 253 IPR001938 -
Glsi04g0217 254 Gene3D Thaumatin 32 253 IPR037176 -
Glsi04g0217 254 PANTHER OS03G0233200 PROTEIN 20 253 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0217 Glsi-ChrGlsi04 1395158 1395922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0217 5 253 Receptor kinase-like Gene Family AT5G38280 36.614 2.26e-42 151