Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0214 ATGGCGAAGACATTAATTTCCTCTCCTTCATTCATAGGCACGCCACTTCCTTTAATATCTCGCCTTGGTCTACACACCTTCCCTCACCGTAGGCTGGTCAGCACCAGAGTCAAATTCAGCTTACACGAAATTCCCCCACTGCAATCTCTGAATTATTCCTTTGACTTCAATCAAATTGTTACAAAAACTGAAGGGCTTCTTTACACGCTTGCTGATGCCGCGGTTGCCGGGGATTCAGGTGCTGGTGCAGTGGCATCCCCCTCCACGGATGTTGCTGCACAGAAGAACGCGGGGTGGTTCGGTTTTATCTCCGACAGTATGGAATTTGTTCTCAAGGTTTTAAAGGATGGCCTTAGTGCTGTGCATGTTCCTTACGCATACGGATTCGCAATAATATTCCTCACTGTTATTGTCAAAGTTGCAACATTTCCCTTGACTAAGCAACAGGTCGAATCAACGCTTGCGATGCAAAATCTTCAACCAAAAATTAAGGCTATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAAACATCAAGGCTATACAGGCAGGCTGGTGTCAACCCATTGGCAGGTTGCTTCCCAACTTTGGCTACTATTCCAGTCTGGATAGGTCTCTACCAAGCTTTATCAAACGTGGCAAATGAAGGACTGTTTACAGAAGGTTTCTTTTGGATCCCCTCTCTGGGTGGTCCAACTACCATTGCTGCCAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCTTTTGTGGATGGTCATCCACCCTTGGGTTGGCATGACACTGCAGCATATCTCGTTTTACCTATCCTCCTTGTTGCTTCTCAGTACATTTCTATGGAAATCATGAAACCGCCCCAGACCGATGATCCAGCTCAAAAGAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCGCTGTCTGTCCCATCAGGACTATCAATTTACTGGTTTACAAACAATATCTTGAGCACAGCACAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCAAGTGGAATTATTACTGCAGGACGTGCTAAACGATCAGTTTCTCAGCCAGCAAGAGCTGGTGAGAGGTTTAGACAGCTTAAGGAAGAGGAGAAAAAGAAGTTAAGCAAGGCACTTCCAGAGGAAGAGGCTCAACCTCTGGCTTCAGTTTCTGATTCTGATGATGATTCGGAGGAAGAGAGTAATGACAAGGGTCAGGAACTTGCGGAAGAAGCATATGCTTCTACAGTTAGCAAGGAGGTTCCAAATTATTCTAGGGAAAGAAGAAGCAAGCGCTCAAAGCGGAAACGTGCTGTATAA 1356 0.4469 MAKTLISSPSFIGTPLPLISRLGLHTFPHRRLVSTRVKFSLHEIPPLQSLNYSFDFNQIVTKTEGLLYTLADAAVAGDSGAGAVASPSTDVAAQKNAGWFGFISDSMEFVLKVLKDGLSAVHVPYAYGFAIIFLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWHDTAAYLVLPILLVASQYISMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPARAGERFRQLKEEEKKKLSKALPEEEAQPLASVSDSDDDSEEESNDKGQELAEEAYASTVSKEVPNYSRERRSKRSKRKRAV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0214 451 MobiDBLite consensus disorder prediction 360 451 - -
Glsi04g0214 451 MobiDBLite consensus disorder prediction 368 392 - -
Glsi04g0214 451 Coils Coil 377 397 - -
Glsi04g0214 451 MobiDBLite consensus disorder prediction 400 417 - -
Glsi04g0214 451 NCBIfam membrane protein insertase YidC 127 340 IPR028055 -
Glsi04g0214 451 CDD 5TM_YidC_Alb3 128 341 IPR047196 -
Glsi04g0214 451 Pfam 60Kd inner membrane protein 127 341 IPR028055 -
Glsi04g0214 451 PANTHER OXA1 71 386 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0214 Glsi-ChrGlsi04 1368898 1377471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0214 34 394 Chloroplast and Mitochondria Gene Families AT2G28800 72.099 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0214 04 1368898 1377471 Glsi04g0214 04 1368898 1377471 ECH