Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0198 ATGAAACAAACACAACGCTCTTTATCCGACGTGTGGGGCACATTGAAATCAGGTAGTCCTCGGCATTGGAAGTGGTCCCCAAGCTGGAACTGTTGTCCACTTGACAACGAGCGTGAAATACACACGCTCTTTAACGAAGGTTATTTGACAAGCAAGCTTACTGTGTGTTTCACCGGGAACGGAGGTGGTCGCCGGAAGCAGGATATATCTATTTTGATAACTGAGCCACTCGACGAGGGACTCGGCCACTCGTTCTGCTACGTTCGACCTGACCCGTCTCGTTTATCTTCGTCCAAAGTCCACTCCGAAGAGACCACTACCTTCCGAACAATCTCAGGCGCGTCCGTCAGTGCGAACACATCGACTCCTCTCTCCACAGCTTTTGTTGACTCGTACTCCTACGGCTGTATTGACAGAGCTGCCGCTTTTGAGAGTTCGACTTCTTTTGCTTCGCTTCCTCTGCAACCAATTCCCAGAAATCTGATGAACTCTGGCCCTTTTTCGGGAAATCTCGGTGGAATTCCGGGGTCGGGTCCACTGGAAAAAGGCTTCTTGTCGGGCCCAATCGAGCGTGGATTTATGTCGGGTCCGATGGAAAAGGGTAGTTCCGATCAATTTCAGAGAAGCTATTCTCATGGAGGTTTACCGTTTAGACCCAGGACAAGAAAAGGCCGATGGATGCGAATTCTTCAGAGAGCTATCTCGAAGACCTTGCCCCGGGGGCAGAACTCGGTTGTTGCTCCGATTAAGGGGATTGCCACGATGAAAGAACCGGAATGGATTTTTGGGCCGGCGAAACACAATGAGAATTTGACCGTGAGTAGTGTGCATTTCAGTAGCGAGGGTAGTTTAGAAGACGACGATTCTATGGAAATTCAAAACCTTCAATGGGCTCAAGGCAAAGCAGGGGAGGACCGTGTTCAGGTTGTGGTATCAGAGGAGCACGGCTGGGTTTTCGTGGGGATTTATGATGGTTTCAATGGTCCTGATGCTCCCGATTATCTTCTATCGAATCTTTACACCGCCGTGGATAAAGAATTGAAGGGATTATTATGGGATGACGGGTTTGAGACCGCCGCCGCCCCTGACACCTCCGCCATTCAACCAGAGAATTGTAATTTGGAAGTGGAAGATTCGTTACAGAGCAGCGATAGTGATGTTGGAAAGGACAGCTTGGCAGATGCTTGTTCTCAGTGTGTTGAGAAACAGAATCATCTGCGCACAAGTGGGGATGCGAATTCTAATCCGATTTTAAAGAGAAAGCGAGGTAAAAATTCTCAGAACAGGTATAAAGGGGCAGCGAAGAAATGTGAGGAGAATCAGCTAAGGTGGAAGTGTGAATGGGATCGCGAGAGAGTAGAGCTTGATAGAAGATTGAAGGAGCAACTAAATGGGTCTCGATCTGGTGGCCCCAACGCAGTTAATCATTTGGATGTATTGGAAGCTCTTTCGCAAGCTCTAAGGAAAACAGAGGCGGCTTATTTGGATATTGCAGATAAGATGCTTACGGAAAATCCAGAGCTAGCGTTAATGGGTTCGTGCGTTCTTGTAATGTTGATGAAGGGAGAGGATATTTATGTAATGAATGTAGGTGATAGTAGAGCTGTTCTAGCTCAAAAGGCGGAGCCTGATTATTGGATTGGGAAAATCCGGCAGGACTTGGAGAGGATCAACGAAGAAACAATGCATGATCTTGAATCATTGGACGGTGATAGAACCAATTTGGTTCCCAGTCTAAATGCATTTCAACTTACCAAGGATCATAGCACCAATGTGGAAGAGGAAGTCCTGAGAATAAAAAAAGAACACCGTGATGATGCTTTTGCTGTCGCAAATGATCGTGTTAAGGGTTCTTTGAAAGTTACCCGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAGTGGAATAATGCACTTCTGGAGATGTTTAGAATAGACTATGTAGGAACATATCCCTACATCACCTGCCAACCATATTTAAGGCACCACAGATTAGGCCCAAAGGACAAGTTTTTGATTCTATCCTCCGATGGGCTCTACCAATACTTGACAAACGAAGAGGCAGTAGCTGAAGTTGAACTTTTCATCACTTTGCAACCTGAGGGAGACCCCGCACAACATTTGGTTGAAGAAGTGCTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTCGAAATACCACAGGGTGATAGGCGTCGTTACCACGATGATGTCTCCATTATTGTCATTTCTTTGGAGGGAAGGATATGGAGATCCTATGTACAAGTATAG 2283 0.4652 MKQTQRSLSDVWGTLKSGSPRHWKWSPSWNCCPLDNEREIHTLFNEGYLTSKLTVCFTGNGGGRRKQDISILITEPLDEGLGHSFCYVRPDPSRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDSYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGGIPGSGPLEKGFLSGPIERGFMSGPMEKGSSDQFQRSYSHGGLPFRPRTRKGRWMRILQRAISKTLPRGQNSVVAPIKGIATMKEPEWIFGPAKHNENLTVSSVHFSSEGSLEDDDSMEIQNLQWAQGKAGEDRVQVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVDKELKGLLWDDGFETAAAPDTSAIQPENCNLEVEDSLQSSDSDVGKDSLADACSQCVEKQNHLRTSGDANSNPILKRKRGKNSQNRYKGAAKKCEENQLRWKCEWDRERVELDRRLKEQLNGSRSGGPNAVNHLDVLEALSQALRKTEAAYLDIADKMLTENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESLDGDRTNLVPSLNAFQLTKDHSTNVEEEVLRIKKEHRDDAFAVANDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTYPYITCQPYLRHHRLGPKDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSYVQV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0198 760 CDD PP2Cc 478 749 IPR001932 -
Glsi04g0198 760 MobiDBLite consensus disorder prediction 405 421 - -
Glsi04g0198 760 PANTHER PROTEIN PHOSPHATASE 2C 285 747 IPR015655 GO:0004722|GO:0006470
Glsi04g0198 760 SUPERFAMILY PP2C-like 301 750 IPR036457 -
Glsi04g0198 760 Pfam Protein phosphatase 2C 481 705 IPR001932 -
Glsi04g0198 760 MobiDBLite consensus disorder prediction 405 432 - -
Glsi04g0198 760 Gene3D - 265 755 IPR036457 -
Glsi04g0198 760 ProSiteProfiles PPM-type phosphatase domain profile. 286 749 IPR001932 -
Glsi04g0198 760 SMART PP2C_4 288 747 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0198 Glsi-ChrGlsi04 1298766 1301832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0198 52 758 PP2C-type Phosphatase Gene Family AT2G28890 66.298 0.0 899