Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0181 ATGTGTGAGAGAGAATTTTCGTCAAGGCCTCCTCTTATATCTCCAATTAGCAGTTTTATTTTGCCGTTAAAAGCAGCTTTGAGGAACCATTGCCATTTCTGTGCGTCCCTTTCTGCATTGCATCCTATTGGGTTAAAATTGCCTCCAGGTCCCTTCATCTTTCAATTAGGCTTTGACGTAGAAATGGGTAGCCCTGAAAAGAATGAAAGTGGGGGTTTTTTTGGTGCCATGACCTCTGGCTTATCCAAGTTCAGCAACGCTATGCACCGATCAGTTAACGGGTTCCTAAGATATGAAGGGGTGGAAGTCGTAAATCCAGAGGGAGGTAAAGATGACGCAGAGGAGGAAGCCCAGAGAGGAAGATGGAAACAGGAGGAAAGAGATAGCTACTGGAAGATGATGCAGAAGTACATAGGCTCAGACGTAACATCAATGGTGACGCTACCTGTTGTTATTTTTGAGCCAATGACCATGCTTCAGAAGATGGCAGAGTTGATGGAGTACTCCTACTTGCTAGATCAAGCAAATGAATGCGAGGATCCTTACTTGCGGTTGGTGTATGCCTCTTCATGGGCTATATCTGTGTACTTTGCGTACCAACGAACCTGGAAGCCTTTTAATCCTATCCTAGGAGAGACTTATGAAATGACAAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGTCACGCTGAGAATGAGCATTTTGCCTATGATGTGACATCAAAGTTAAAAACTAAGTTTTTGGGAAACTCTCTTGATGTTTACCCTGTTGGAAGAACACGTGTGACCCTCAAGAGAGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACCTTATATTTGGCCGGACTTGGACAGATTCACCTGGGGAAATGATAATGACTAATTTGATGACTGGAGACAAAGTTGTACTATACTTTCAACCATGCGGCTGGTTTGGTGCTGGTCGCTATGAAGTGGATGGGTATGTTTATAATGCTGCTGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTTGATGAGCTATCAACCTTGTGATTTGGAAGGAGAACCTCTTCCGGACACACAATTGAAAGAGGTTTGGCATGTTGCCGATGTTCCAAAGAATGATAAATTCCAGTATACATATTTTGCACACAAAATTAATAGCTTTAACACGGCCCCTGGCAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATTTGCACTTGAGATGGGTGATCTATCCAAAGCTGGTGCAGAAAAGAGCAGGTTGGAGGAGAGGCAGCGTGCTGAGAAGAGAGCAAGAGAGGCCAAGGGGCATCACTTCACATCCAGATGGTTCGATTTAACTGAAGAATTAACTTCTACTCCTTGGGGTGATTTGGAAATCTATCAATACAATGGTAAATACACTGAACATCGGGCTGCGATAGATAAGTTGGGCAACATTGATGATGTTGATAATAAATCCATTAAATTCAGTCCATGGCAGTATGAGAACGATTTTGTTGCCAAGTCTGATGGGAAAGGTTTTGAAGCAACCACAATCCTGCAAAAAGGGTTGGCGTTGTGTTGGGTTGGGTTGAAGGACCAGGCTCCCAAGTCCCATCCTCAGCCAAGTGTTCCATTGCAACCAACTCCAAATAATGGTCTACTGTTTTCAAGTTTGATCTTCAGCAACTTTAGCAAGTGGAGGGAGAGGATCCAAAGCCAATGCACGTGCCCGCATCGAATAGCACATTCCGCTCTACTGGGTTACCAAATTGCTAGGAACCGAGGAACCGCTCTACTGGTGGTTCCCATTCACCTGCTATATCCGGTGGACCTCCATGCCTTCACCGATAGGTCCTGTGACGGGGGGTCAATGAATTCGGCTTCTGGTGATTTGATGTCAGATTGCCGGTTGATTCCTGGGTCTGCACCTCATAGCCTTCAAATTGAGATTTGTGAGGTTCAGCGCCAGTTATTGCAAGATAAAGAGACATCCATTACTTCTAGTAATACACCATCAGAAAAGGATCAGTACGGATATGCTATGGAAGAGAGCCAGAATACAAATAAGCCATTGAAATCTGAGCTTTCTGATGAAGGAAGCTGCGACAGAATATACTTCTCTGATCATTCTTCACCAGCATATGATCAAAATTGTAGTTTGAAAGAAATCCCACATCCTGAAAATGATGGCCATTCAGGCATAGCTTTTAAAGTAACAAATTCTAATTGCTTTTTGATGAATGGAAAAAGCCATAATCAAATGGAAAACTTTGCTGGCATAGTTGAATTAGGTTCCTCTGGGTGTGCAGAGTTTAGTGGTTGCAAGTTAGATTGTGATATAAGTAAAGTAAAGGATGAGCAGATTGGGAATGTGTCAATTTATATGGGGACCAAGAAGTGCAGATTTGAGGATCCCTTGGATGAAAAACCTCCTGCCCTGATTAGTTCCGGTGGCAATGCCAAATTGTCTGGGTGTGATGACAATGTTCCTTGTAGCTCATTGTCCAAAGATTGTGACAATGTACCAGTAATTAGTAGAGATGATGACGAAAACTGTTTTGGGTGTACTCACCCTAGTACCAAAGCAAAGTCCTTTAGGTCAGTGACCCATATAGGTGACAGAAGAATAAGGAAAATATTGGCATCTAAATATTGGAAAGCTTCTTCGGAATCAAAGGATGATAAACTCTCTGATAGAGATGAAAATTTGAAGCCAATTTACTACAGTAGGAAGAACTTTTATAAATGCCAAAGACCTGAAATGCTTATTCCTTTCAAAAAGAGGAAGCTTCGTGATCATGTCAGAAGTGATGGCACTTTTCATTCATTTGAGAAGAGCATGAGTCAAGATGCTTCTGGTTCATCTCCTAGGATGCGTGGAGACCCTGGAATGTCATCCTCAGAAGCACATCAATGCACTGCATTGTCATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTACCAGAGCTTTTTATTGAGATTCCAGAAACAGCAACTATCGGCTGCTTGAAGAGGACAGTGATGGAGGCAGTGACTGCTATACTTGGAGGTGGATCACATGTTGGTGTAATTCTCCAGGGAAAGAAGGTTAAAGATGACAACAAGACTTTAATTCAAACAGGAATTTCTCATAATCAGCTGGATGCTGTGGGCTTTACCCTGGAACCAAATTCTTCAAAAGATCTCCTACCCATATGTGCTGCAGATTCCCCCCATGTACCTCACGCAGACATGTCAAGGAATCCAACCACTTTCAGTCCAGCCGTAGTTCATCAGAGGATTCAGGGCATTTCTGACATTGTACCAGAGCATCGAGTAACCAGCTCAAGTAACCCTGTTGTAAGTGATCACGATTCAGCACCTTCACCTATCGACACATCTGTTGATAAAGGTATGACAGATTCCAGAGCACTGCTATCTGTTCCCGAGATGGGTATGGAGGCACTAGCGGTAACACCTGTGCACCAGAAGACAAAAAGATCTGAGCTTGTGCAGCGCCGCATTCGCAGGCCTTTTTCTGTTGCTGAAGTTGAAGCATTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAATTCTGTGCTTTTGATGACGCAGAGCATCGGACTTATGTGGATTTGAAGGATAAATGGAAAACTCTGGTTCACACGGCAAGAATACCCCCTCAGCAAAGGAGGGGAGAGCCTGTCCCTCAGGAACTTTTGGACAGGGTCCTAACTGCCCACGCATACTGGTCCCACCCACCAGCAGACTAA 3813 0.4369 MCEREFSSRPPLISPISSFILPLKAALRNHCHFCASLSALHPIGLKLPPGPFIFQLGFDVEMGSPEKNESGGFFGAMTSGLSKFSNAMHRSVNGFLRYEGVEVVNPEGGKDDAEEEAQRGRWKQEERDSYWKMMQKYIGSDVTSMVTLPVVIFEPMTMLQKMAELMEYSYLLDQANECEDPYLRLVYASSWAISVYFAYQRTWKPFNPILGETYEMTNHGGITFLAEQVSHHPPMSAGHAENEHFAYDVTSKLKTKFLGNSLDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWTDSPGEMIMTNLMTGDKVVLYFQPCGWFGAGRYEVDGYVYNAAEEPKILMTGKWNELMSYQPCDLEGEPLPDTQLKEVWHVADVPKNDKFQYTYFAHKINSFNTAPGKLLASDSRLRPDRFALEMGDLSKAGAEKSRLEERQRAEKRAREAKGHHFTSRWFDLTEELTSTPWGDLEIYQYNGKYTEHRAAIDKLGNIDDVDNKSIKFSPWQYENDFVAKSDGKGFEATTILQKGLALCWVGLKDQAPKSHPQPSVPLQPTPNNGLLFSSLIFSNFSKWRERIQSQCTCPHRIAHSALLGYQIARNRGTALLVVPIHLLYPVDLHAFTDRSCDGGSMNSASGDLMSDCRLIPGSAPHSLQIEICEVQRQLLQDKETSITSSNTPSEKDQYGYAMEESQNTNKPLKSELSDEGSCDRIYFSDHSSPAYDQNCSLKEIPHPENDGHSGIAFKVTNSNCFLMNGKSHNQMENFAGIVELGSSGCAEFSGCKLDCDISKVKDEQIGNVSIYMGTKKCRFEDPLDEKPPALISSGGNAKLSGCDDNVPCSSLSKDCDNVPVISRDDDENCFGCTHPSTKAKSFRSVTHIGDRRIRKILASKYWKASSESKDDKLSDRDENLKPIYYSRKNFYKCQRPEMLIPFKKRKLRDHVRSDGTFHSFEKSMSQDASGSSPRMRGDPGMSSSEAHQCTALSSRDSHVKLRIKSFRVPELFIEIPETATIGCLKRTVMEAVTAILGGGSHVGVILQGKKVKDDNKTLIQTGISHNQLDAVGFTLEPNSSKDLLPICAADSPHVPHADMSRNPTTFSPAVVHQRIQGISDIVPEHRVTSSSNPVVSDHDSAPSPIDTSVDKGMTDSRALLSVPEMGMEALAVTPVHQKTKRSELVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKFCAFDDAEHRTYVDLKDKWKTLVHTARIPPQQRRGEPVPQELLDRVLTAHAYWSHPPAD 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0181 1270 Gene3D - 1172 1270 - -
Glsi04g0181 1270 Gene3D - 211 386 - -
Glsi04g0181 1270 MobiDBLite consensus disorder prediction 1122 1145 - -
Glsi04g0181 1270 FunFam Oxysterol-binding protein-related protein 3C 419 512 - -
Glsi04g0181 1270 MobiDBLite consensus disorder prediction 673 706 - -
Glsi04g0181 1270 CDD SANT_TRF 1185 1235 - -
Glsi04g0181 1270 SUPERFAMILY Oxysterol-binding protein-like 124 491 IPR037239 -
Glsi04g0181 1270 Gene3D - 420 516 - -
Glsi04g0181 1270 SMART sant 1183 1236 IPR001005 -
Glsi04g0181 1270 SUPERFAMILY Homeodomain-like 1185 1265 IPR009057 -
Glsi04g0181 1270 MobiDBLite consensus disorder prediction 952 985 - -
Glsi04g0181 1270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1180 1238 IPR017930 -
Glsi04g0181 1270 ProSiteProfiles Myb-like domain profile. 1179 1234 IPR001005 -
Glsi04g0181 1270 ProSitePatterns Oxysterol-binding protein family signature. 227 238 IPR018494 -
Glsi04g0181 1270 FunFam oxysterol-binding protein-related protein 3C 211 388 - -
Glsi04g0181 1270 MobiDBLite consensus disorder prediction 1122 1144 - -
Glsi04g0181 1270 SUPERFAMILY Ubiquitin-like 987 1060 IPR029071 -
Glsi04g0181 1270 PANTHER TELOMERIC REPEAT BINDING PROTEIN 663 1266 IPR031105 -
Glsi04g0181 1270 MobiDBLite consensus disorder prediction 673 705 - -
Glsi04g0181 1270 Pfam Oxysterol-binding protein 129 487 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0181 Glsi-ChrGlsi04 1216868 1231342 Dispersed/Wgd