Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0176 ATGGATACTCTTATGGAAAAATTTCCTGGTTGCGTCGATGGATTTAGATTTGATAATGGTCATATTTCGGTAGTACCAAATCAGACCCCAGTAAACGGGTTTCAATTCGATGATAAATTCGTTGATTCCTCTTGCCGTCGGACTAATTTAGAATCTCCCAGTGATTCTGGTCCTTCATCTGGCACGGCCTCAAATGAAGAATCTGCAGAGAGTAATAAATATTCCAATCCCATTCTCGGGTACATAAGTGAGATCCTCATGGATGAAGAAGACGACTTGGAGCGCAAGCCCTGCATGTTGCAGGATTGTTTAGCGCTCCAGGCTGCCGAAAAATCATTCTATGATGTTCTAGGTCCTAGTTACCCCTCATCACCCCATCAAACTCCTGGTTGTTTCCACGGTGAAAACTTCAATAGCCCAGATGATAACTTTGTTCGTACCGCAAGTTTTGAGAGCAATAGCAGCTTTACCACTGATAATTCATCTGATTCCGATTGGATTAACGGTGCCGGTGAGTTTGAATCCTCTTTCCTACAAACTTCGTTAGTTAATTCCCCAGAAAACACCTTCGTTCCAGATCTTGCTCCTGATCCATCTGGAGAGACATACGCTGCAGCCTGGGATATCATTCACCCACAGATCAACCCGCTGATGAATCTGGAGGATGCCATGGTTAATTCAGCACCCAGAGGATCAAGGGAAAAGAGAAGCCATTGGATGGATGATTCTATAAATGATGAAGAGGGGAGAGACAGCAAACTTTCGGCTGTCTATTCCGAAGATTCAGAGTCATCGAAGATGTTTGATGAAGTGCTGCTGTGTCATGGTCATGGCAGCGGCAGTCAATCCACTGAATGTGGTGGTTCTGAACCATCACAAAATGGCATATTCCAGCTGAATATTGACTCAGGCGTATCAAAAGGGAAGGCAATGCGTTCAAAGAAAGGGGGTAACAAGGGGACAGCGGTAGATTTATGGACTCTACTAACTCAATGTGCACAGGCTGTGGCAAGCTATGATCAAAGGAGTGCAAATGACACACTGAAGCAGATTAGGCAGCACTCTTCCCCTTTTGGCGATGGAATCCAACGTTTAGCTCACTACTTTGCTGATGGCCTTGAGACTCGATTAGCTGCTGGGACACCATCATATATGGCCCATTGTTGTATTGGGGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTATACATTACAGCATCTCCTTTTCTGAGGATTTCAAATTTTTTGGCTAACAGAACAATTCTAAAGCTAGTACAAGATGCAACCAGCCTTCACATTATTGATTTTGGCATCTGCTATGGTTTCCAGTGGCCTTGCCTCATCCAACGTCTTTCAGAAAGACAAGGTGGTCCTCCCAAGCTTCGTATAACAGGAATTGATTTTCCTCAATCAGGGTTTCGGCCTGCAGAAAGGGTTGAGGAGACAGGGCGAAGGATAGCAAACTACTGCAGGAGGTTCAATGTCCAGTTTGAATACAATTGCATAGCACAGAAATGGGAAACCATCCAACTTGAGGATCTCAAAATCAACAGAAGTGAAACAACCGTGGTTAACTGCTTGTACCGATTGAAGAACCTCCCTGATGAGACTGTGGCTGTGAACTCTCCTAGAGATGCTGTTTTAAAGTTGATAAGGAAGATCAATCCAAATATCTTCATACATGGGATTGTCAATGGTACTTACAATGCACCATTTTTTGTGACCCGGTTTAGGGAGGCGCTGTTCCACTTCTCATCTTTGTTTGATATGTTTGAGGCTAACGTGCCTCGAGAAGATACAGAGAGGCTGATGTTTGAGAGAGGGATAATTGGAAAGGAGGCCATAAATGTTATAGCGTGTGAGGGGGCTGAGAGGCTTGAAAGGCCGGAGACCTACAAGCAGTGGCAGGTTAGGAACCGTAGAGTTGGGTTCAAGCAACTCCGACTGGACCCAGAACTCTTTAATAAAGCGAAAGAAATGGTGAAGACTGAATATCATAAGGATTTCGTAGTGGATGAGGATGGCAAGTGGGTTTTGCTGGGATGGAAAGGGCGTATTATTCATGCTCTATCTTGTTGGAAACCTGCTTAA 2094 0.4436 MDTLMEKFPGCVDGFRFDNGHISVVPNQTPVNGFQFDDKFVDSSCRRTNLESPSDSGPSSGTASNEESAESNKYSNPILGYISEILMDEEDDLERKPCMLQDCLALQAAEKSFYDVLGPSYPSSPHQTPGCFHGENFNSPDDNFVRTASFESNSSFTTDNSSDSDWINGAGEFESSFLQTSLVNSPENTFVPDLAPDPSGETYAAAWDIIHPQINPLMNLEDAMVNSAPRGSREKRSHWMDDSINDEEGRDSKLSAVYSEDSESSKMFDEVLLCHGHGSGSQSTECGGSEPSQNGIFQLNIDSGVSKGKAMRSKKGGNKGTAVDLWTLLTQCAQAVASYDQRSANDTLKQIRQHSSPFGDGIQRLAHYFADGLETRLAAGTPSYMAHCCIGATAAEMLKAYKLYITASPFLRISNFLANRTILKLVQDATSLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIDFPQSGFRPAERVEETGRRIANYCRRFNVQFEYNCIAQKWETIQLEDLKINRSETTVVNCLYRLKNLPDETVAVNSPRDAVLKLIRKINPNIFIHGIVNGTYNAPFFVTRFREALFHFSSLFDMFEANVPREDTERLMFERGIIGKEAINVIACEGAERLERPETYKQWQVRNRRVGFKQLRLDPELFNKAKEMVKTEYHKDFVVDEDGKWVLLGWKGRIIHALSCWKPA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0176 697 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 248 687 IPR005202 -
Glsi04g0176 697 ProSiteProfiles GRAS family profile. 316 695 IPR005202 -
Glsi04g0176 697 MobiDBLite consensus disorder prediction 228 253 - -
Glsi04g0176 697 MobiDBLite consensus disorder prediction 47 72 - -
Glsi04g0176 697 Pfam GRAS domain family 327 695 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0176 Glsi-ChrGlsi04 1195937 1198030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0176 1 696 GRAS Transcription Factor Family AT2G29060 44.017 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi04g0176 GRAS 5.4e-115 CL0063