Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0173 ATGCAACTCTTCACATCACCCGTTTTCTATTCTCACCTGCTTCCTTCCTTCTTCCTCCTCTTCTCTTGTTTGTTCCTTGTGCGACTTTTCCTTCAATGGCGCCTCTCCAAAGACAAACGCTTACCGCCTGGTTCCGTCGGCTGGCCCTACATAGGAGAAACCCTCAAGCTCTATACTGAAAACCCAAATTACTTCTTCTCCAACAGGCAAAAACGGTACGGAGACATCTTCAAGACACACATACTGGGATGTCCTTGTGTGATGATTTCAAGCCCCGAGGCAGCGAGAACCGTGCTGGTGACTCAAGCACATCTGTTTAAGCCAACATATCCCCCAAGCAAAGAGAAATTGATCGGGCCAGAGGCCGTTTTCTTTCAGCAGGGTGCCTATCACTCCATGCTTAAGAAGTTAATTCAGGCCTCCTTCTTACCCTCTGCAATTAAGAAATCAGTCTCAGAGGTTGAGCAAATGGTCCTCAAATTGCTGCCGACTTGGAAGGACACAACCATCAACACCTTACAAGAAATGAAGAGGTATGCTTTCGAGGTAGCGGTCATTTCAGCCTTCGGTGAAAAGAAGGAACTTGAAATGGAAGATATCAAAAACCTTTATCGGTGCTTGGAGAAGGGCTACAATTCCTTGCCTTTGGATCTTCCTGGAACTTCCTATCGGAAAGCGATGAAGGCAAGAAAGCTTCTGAATGAGAGTATAAGGAAGTTAATACAGAGAAGAAAGGAAAGTGGAAACCATGGTGGAGGCTTGTTGGAAGTTCTATTGCGAGCAAGAGGTGAAGACATATACCAACTCACTGATTCCCAGATTGCCGATAATCTCATAGGCGTGATATTTGCGGCGCACGATACCACTGCGAGCGCTATAACATGGATTCTAAAGTACTTGCACGATAATGTTGATCTCCTGGAATCGGTGACGAAAGAGCAGGAAGGGATTAAAAGCAAACTTGTTGAAGAAAATCGTGGGCTTACGTGGGATGATACCAAGCGCATGCCCTTCACTAGCCGGGTAATCCAAGAAACGCTGAGAAATGCAAGCATACTGTCATTCACATTCAGAGAAGCTGTACGAGATGTTGAGCTCGAGGGTTATTCTATTCCTAAAGGTTGGAAGGTCCTTCCTCTCTTCAGAAGCATTCATCACTGTGCTGATTTCTTCCCTCAGCCAGAGAAGTTCGACCCTTCCAGATTTGAGGTGCCACCGAGACCAAACACGTACATGCCATTTGGAAATGGAGTTCACGCTTGCCCCGGCAGTGACCTGGCTAAGCTCGAGATGCTCGTCCTCCTCCACCACCTCACCATTTCTTACAGGTGGCAAGTTGTGGGAAATGAAGATGGTATACAGTATGGTCCTTTTCCAGTGCCCAAACATGGATTACCAGTAAAGATAATCTCGAGGAACAAGACACTTACCTGA 1434 0.4644 MQLFTSPVFYSHLLPSFFLLFSCLFLVRLFLQWRLSKDKRLPPGSVGWPYIGETLKLYTENPNYFFSNRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQAHLFKPTYPPSKEKLIGPEAVFFQQGAYHSMLKKLIQASFLPSAIKKSVSEVEQMVLKLLPTWKDTTINTLQEMKRYAFEVAVISAFGEKKELEMEDIKNLYRCLEKGYNSLPLDLPGTSYRKAMKARKLLNESIRKLIQRRKESGNHGGGLLEVLLRARGEDIYQLTDSQIADNLIGVIFAAHDTTASAITWILKYLHDNVDLLESVTKEQEGIKSKLVEENRGLTWDDTKRMPFTSRVIQETLRNASILSFTFREAVRDVELEGYSIPKGWKVLPLFRSIHHCADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHACPGSDLAKLEMLVLLHHLTISYRWQVVGNEDGIQYGPFPVPKHGLPVKIISRNKTLT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0173 477 Gene3D Cytochrome P450 33 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PANTHER CYTOCHROME P450 26 39 461 - -
Glsi04g0173 477 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 SUPERFAMILY Cytochrome P450 35 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 Pfam Cytochrome P450 42 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g0173 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Glsi04g0173 477 CDD CYP90-like 69 469 - -
Glsi04g0173 477 FunFam Abscisic acid 8 32 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0173 Glsi-ChrGlsi04 1181070 1184672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0173 19 467 Cytochrome P450 AT3G19270 56.541 0.0 540