Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0149 ATGACCAAAAAGCTAGATTTCACAATTCTCAACCTTGCTTCTGATTTACTATCTACTCTCATACCCAGGATCAATTTGTTGAAGCAAATGGATCATGAGAAAGCACCTGTCTTGGAAGCAAGGTCCGTGCAGGAAATTGAGATACTAGTTGCCTCTAAAAGACTTGATGTTGTTCCTATGGCAACAGGGTCATCTTGCAGTTCTGTTTGCCCTTTTTCCCGACAAGAACATAGTGTTCTGGCATCAGAAGAGTCGTCAAAGTCAGTAAAGAAACTTAGTGGACTAATAGTTTTCTACGCAGTGGTTATGCTTGTGGAAGTTTTTGGTGGTGTGAAAGCCAACAGCCTTGCTGTCATCAGCGACGCAGCACACTTGCTTTCTGATATTGCTGGATTCTCTATTTCTCTCTTTGCAGTATGGGCTTCAGGTTGGGAGGCAACGTCGCGTCAGTCTTTTGGATACAATCGCCTTGAGGTTTTGGGCGCTCTTTTATCTGTGCAGTTAATTTGGCTAATATCTAGTTTTTTAATATATGAGGCAGTTGGTAGACTTCTTCACAGAAATGCCAGGGTGAATGGAATGCTCATGTTTGCAATTGCAGCATTTGGGTTTGTTCTTAACTTAGTTATGGTCGTATGGCTTGGTCATGATCACAGTCATCATCATCATGTCTGTGGAGACTGTGATCATGACCATGGGAAGGAGCTACAAAACATAACAGATGAAGAGAATCTTAGTCTCGTTTCCAGCAGTCCTAAAAAAATGAATGTATTGAACATAAATCTCCAAGGGGCCTATCTGCATGTCATTTCTGATCTGATTCAATCTGTTGGGGTGATGATTGCTGGAGCCATAATATGGGCTAAACCAGATTGGTTAGTGGTAGACCTGATGTGTACTCTCATATTCTCTGTTATATCTCTAAGTACTACTCTGTCCACGCTCAAGAATATTTATGGCATTCTGATGGAGAGGACACCAAGTGAGGTCAATATCATTAAGCTAGAAAATGGCATCAAGGGTATCAAGGGAGTGCAAGATATTCACGACTTACATGTTTGGGCCATAACAGTTGGGAAAAATGTTCTATCTTGTCATGTGGTAGCCAAGCCTGGCATCAGTTCCACTGATTTGCTCGACAGTATTAGGCATTACTGTGAAAAAACATACCAAATTCATCATGTAACCATACAAATAGAGTAA 1203 0.4115 MTKKLDFTILNLASDLLSTLIPRINLLKQMDHEKAPVLEARSVQEIEILVASKRLDVVPMATGSSCSSVCPFSRQEHSVLASEESSKSVKKLSGLIVFYAVVMLVEVFGGVKANSLAVISDAAHLLSDIAGFSISLFAVWASGWEATSRQSFGYNRLEVLGALLSVQLIWLISSFLIYEAVGRLLHRNARVNGMLMFAIAAFGFVLNLVMVVWLGHDHSHHHHVCGDCDHDHGKELQNITDEENLSLVSSSPKKMNVLNINLQGAYLHVISDLIQSVGVMIAGAIIWAKPDWLVVDLMCTLIFSVISLSTTLSTLKNIYGILMERTPSEVNIIKLENGIKGIKGVQDIHDLHVWAITVGKNVLSCHVVAKPGISSTDLLDSIRHYCEKTYQIHHVTIQIE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0149 400 Gene3D Cation efflux protein transmembrane domain 89 322 IPR027469 -
Glsi04g0149 400 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 329 400 IPR036837 -
Glsi04g0149 400 Pfam Cation efflux family 96 323 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi04g0149 400 NCBIfam cation diffusion facilitator family transporter 95 400 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi04g0149 400 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 66 400 - -
Glsi04g0149 400 SUPERFAMILY Cation efflux protein transmembrane domain-like 89 324 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0149 Glsi-ChrGlsi04 1074299 1076333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0149 30 400 Inorganic Solute Cotransporters AT2G29410 50.781 7.79e-123 358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0149 04 1074299 1076333 Glsi04g0149 04 1074299 1076333 ECH