Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0141 ATGGACATGCATCATGACATGGGAGGGATGCCAATGTCACCGCCATCCACGAACGGCACCATCGCTGGGATGCACCATAAGATGATGATACACATGACCTTCTTCTGGGGAAAGAACGCCGAGATTCTGTTCCGCCGTTGGCCTGGAGATAGCACCGCCATGTACGTGTTGGCCTTGGTGTTTGTTTTCGCGATGTCCGTTGTGGTGGAGTGGCTCTCCCGTAGCCGCTTCATCAGGCCCGGTTCGAACCATTTCGGGGCGGGTGTGGTTCAGACCTTGTTGCACGGCGTCAGGGTTGGCCTGGCTTATCTGGTCATGTTAGCACTCATGTCTTTCAATATAGGGGTTTTTTTGGTCGCCGTCGCCGGCCACACTTTGGGGTTCTTCTTCTTTGCCAGCAGGGCTTTTCATCGAGCCGATTACGAAAAAGGGTTCGATCTTTCCCCAGTGACTTGTTAA 459 0.5359 MDMHHDMGGMPMSPPSTNGTIAGMHHKMMIHMTFFWGKNAEILFRRWPGDSTAMYVLALVFVFAMSVVVEWLSRSRFIRPGSNHFGAGVVQTLLHGVRVGLAYLVMLALMSFNIGVFLVAVAGHTLGFFFFASRAFHRADYEKGFDLSPVTC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0141 152 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 23 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
Glsi04g0141 152 Pfam Ctr copper transporter family 32 76 IPR007274 GO:0005375|GO:0016020|GO:0035434
Glsi04g0141 152 Pfam Ctr copper transporter family 84 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0141 Glsi-ChrGlsi04 1053460 1053918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0141 33 152 Inorganic Solute Cotransporters AT5G59030 51.613 1.58e-38 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0141 04 1053460 1053918 Glsi04g0141 04 1053460 1053918 ECH