Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0123 ATGGAGTCTGCAACTCCACCCTCGCCGGAGATCCAACTCGATAACCTCAAAGTACTTAAAGTTCTAGGTAAGGGTGGTATGGGAACCGTCTTCCTCGTCCACGACACCTTTGCCGACCCCTCTGCTCACTCCCCTTTCGCACTCAAGGTCCTCGATAAATCCTCCATCCACACCAAGCTCGATGCTGACCGCCGTGCCCGCTGGGAAATCCAAGTTCTCAACCGTTTGTCTCACCCATTCCTCCCTTCCCTTCTTGGCACTACTGAGTCTGATCAATTCCTGGGTTGGGCCATCCCTTATTGCCCAGGCGGTGACCTCAACGTCCTCCTTCACCGCCAAGTCGACCAGGTTTTCTCCCCCGCTGTCATTCGCTTCTATTTGGCTGAGATCGTCTGCGCTCTCGAGCATCTCCATAGCATGGCCATCGCCTACCGCGATTTAAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGTCACCTCACCCTAACTGACTTCGATCTCTCTCATAAGCTCAAACCAAAAACCATCAGAACCGTCATTTCAACGACAACCGTCCAAGAAATGTTGCCGGACGGCCGCCGTGAACATCGACGGAATTTCGCACGGTGGATCCCCGCCGCACCGGAAATTAGTCATAACAAAAAAGGATTGAAGAAGGCTAAGTCCGCCCGAGTTAGCCCGGTGAATCGACGCAAACCGAGTTTCTCAAATGGGGAGCGGTCTAACTCGTTCGTAGGCACAGAAGAGTATGTTTCGCCAGAGGTAGTCCGAGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCCTGGGAATATTGACGTACGAGATGTTATATGGAAAGACGCCGTTCAAGGGGAATAACCGGAAGGAAACGTTTCGGAATATTTTGGTGAAAGAGCCAGAATTCGTAGGGAAGAGGAACGAGCTAACGGACTTGATCGGGAGGTTGCTGGAAAAGGATCCCACAAAGAGATTGGGTTACGTTCGAGGCGCGAACGAGATCAAGGAGCACGAGTTCTTCAGAGGCGTAAGGTGGGACCTGTTGGCGGAGGTAGTACGGCCACCGTTCATTCCGCCAAGAGAGGACGGTGACTTGACTGCCGGCGGAATGGACATAAGGGATTATTTCCAAAGGTTGAAATCGCCGCCGTCGTTCCCTCCCTCGCCGTCTTCTGAGTATCAGAGGAATATTTCGTTAGCAGAATTTTGA 1212 0.5281 MESATPPSPEIQLDNLKVLKVLGKGGMGTVFLVHDTFADPSAHSPFALKVLDKSSIHTKLDADRRARWEIQVLNRLSHPFLPSLLGTTESDQFLGWAIPYCPGGDLNVLLHRQVDQVFSPAVIRFYLAEIVCALEHLHSMAIAYRDLKPENVLIQQSGHLTLTDFDLSHKLKPKTIRTVISTTTVQEMLPDGRREHRRNFARWIPAAPEISHNKKGLKKAKSARVSPVNRRKPSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGKTPFKGNNRKETFRNILVKEPEFVGKRNELTDLIGRLLEKDPTKRLGYVRGANEIKEHEFFRGVRWDLLAEVVRPPFIPPREDGDLTAGGMDIRDYFQRLKSPPSFPPSPSSEYQRNISLAEF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0123 403 MobiDBLite consensus disorder prediction 215 242 - -
Glsi04g0123 403 PANTHER FLIPPASE KINASE 1-RELATED 10 361 - -
Glsi04g0123 403 FunFam Serine/threonine-protein kinase UCNL 16 104 - -
Glsi04g0123 403 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Glsi04g0123 403 ProSiteProfiles AGC-kinase C-terminal domain profile. 342 403 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi04g0123 403 SUPERFAMILY Protein kinase-like (PK-like) 13 395 IPR011009 -
Glsi04g0123 403 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0123 403 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Glsi04g0123 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Glsi04g0123 403 Gene3D Transferase(Phosphotransferase) domain 1 105 182 - -
Glsi04g0123 403 FunFam Serine/threonine-protein kinase OXI1 105 173 - -
Glsi04g0123 403 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0123 403 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Glsi04g0123 403 Pfam Protein kinase domain 17 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0123 403 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0123 403 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0123 Glsi-ChrGlsi04 929764 930975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0123 11 390 AGC Kinase Gene Family AT3G20830 65.026 4.26e-174 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi04g0123 Pkinase 2.2e-32 CL0016