Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0121 ATGGGTGTAGTTTATTTGCTTATCACAATGAGTCTAGCTGCAGTGAGCTCAGGGGTTGAGTCATGCCCTCCCTCTGAATGGGCGGCACTCATGGCCTTCAAGGCCGCACTCAACGAGCCCTACTTGGGAATTTTTCATTCCTGGAGAGGCACTAACTGTTGCTACAAATGGTACGGCATCAACTGCGACCCTACCACTCGCCGCGTCGTTGATATCACTCTCCGTGCCCTCATTGATGATCCTCTCTTCAAACGCCTCAACCGCACCGGTTACACGACCGGTTCTATCTCCCCAGCCATCTGCAACCTCACCCAACTCTCTACCATTACCATCTCTGACTGGAAGGCTATTTCTGGTAGAATCCCTCACTGTATCACATCCTCTTTGCCTTTTCTCCAAATCATTGATCTTTCAGGAAATTTAATCTCCGGCAAGATTCCCTGGGATATTGGACGACTTCACCAACTTACCACGCTCAACCTCGCAGATAATCATATCTCCGGCAGGATCCCAAGGACGCTGGTCAACCTTTCCAACTTAGTGCACCTTGACCTTAGAAACAACGCGCTCGAGGGTCCCATTCCATGGGACATTGGGAGGCTCAACAGGCTCAGCCGGGCTTTACTGAGCCACAATCGGATCACGGGTCGGATCCCCAGGACGATCTCGAAAATATATGCTCTGGCGGATCTGGACCTGTCTCTGAATCAAATATCAGGGCCCATTCCGGAGTCGCTTGGCAGAATGCGGGTTCTGGATACGCTGAAGCTAAAGTACAACAAGATAAGGGGAATCGTTCCTCCTAGTTTGCTGAGTTCGAGAATGAGTCATATAGATTTGAGCCGAAACCAACTGCATGGGCATATAGCGGACGTTTTCGGAGAAGAAACGTATTTTATAAATCTGGATTTATCGCACAACAATTTGACGGGTTCCATAGCAAGGTCAATGAGATTAGCTAAGTATATTGGGTACTTGGATTTGAGTCACAACCGTCTTTCTGGGCGGATTCCAAGGGGTTCCCCTTTTGATCATCTTGATGCCGCCTCCTTCCATAACAATCATCGCCTCTGTGGAAAGCCTCTTAAGCCTTGCTGA 1098 0.4909 MGVVYLLITMSLAAVSSGVESCPPSEWAALMAFKAALNEPYLGIFHSWRGTNCCYKWYGINCDPTTRRVVDITLRALIDDPLFKRLNRTGYTTGSISPAICNLTQLSTITISDWKAISGRIPHCITSSLPFLQIIDLSGNLISGKIPWDIGRLHQLTTLNLADNHISGRIPRTLVNLSNLVHLDLRNNALEGPIPWDIGRLNRLSRALLSHNRITGRIPRTISKIYALADLDLSLNQISGPIPESLGRMRVLDTLKLKYNKIRGIVPPSLLSSRMSHIDLSRNQLHGHIADVFGEETYFINLDLSHNNLTGSIARSMRLAKYIGYLDLSHNRLSGRIPRGSPFDHLDAASFHNNHRLCGKPLKPC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0121 365 Gene3D Ribonuclease Inhibitor 88 365 IPR032675 -
Glsi04g0121 365 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 289 - -
Glsi04g0121 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 8 112 - -
Glsi04g0121 365 SUPERFAMILY L domain-like 21 364 - -
Glsi04g0121 365 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 128 195 - -
Glsi04g0121 365 Gene3D Ribonuclease Inhibitor 21 87 IPR032675 -
Glsi04g0121 365 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Glsi04g0121 365 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0121 Glsi-ChrGlsi04 921759 922856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0121 86 365 Receptor kinase-like Gene Family AT5G46330 35.664 3.46e-41 152