Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0113 ATGTATGCAACAACGGCGCCTCTCTCTCGCACGCTTTTATACTTTTCCACTTGGAGCAACCCAATGCATTCAATGAGAGAACTTCGCTGCATGTTTCACTGCCACTTGGCATATTCAAGTTTACTACTTTATGCTGACTGCGGCATTGCGATTACAGGAAGTGGCATTGGATTGTGGAGGTTCATCTTTTGTACCGTTGAACCTTTGTCTGAAACTGAAGGGCTAGATGATGTATGCATACAACTACAATTGATGGTAGTTGGACTGAGTTTATCAACTAATCTCTACAGGTTCCGAAGACAGCGAGCTCTGAATTCAGAGCAGATGGATCCACTAAGATCTATAGAGGACCAATTCTCCAAGCTACATCCGTCCTTCCCAGTAAACACCCGAATTGGCATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTATCCAGGCTTGGTTATGAAAATGTGACTGTCTTGGAGAAGTATCATACAGTTGGTGGCATGTGTGAATCTGTAGAAATTGACGGGAAAGTTTATGATCTGGGCGGGCAAGTTCTTGCTGCAAGCAGTGCTCCTGTAATCTTTCACCTGGCAAAGGAGACTGGGTCTGCGCTAGAAGAATTAGACTCCCACAAGCTTGCCGTTATTGACCGTTCTACTGGAAAATATCAAGATATTAAAGTTGCAGACGATTACGTATCTGTGATGTCACTTACATTGGAAATCCAAGAAAAGGTAAAGAATTCTGGTCGTATTGGGGTCCATGCTATCAGCGAACTTGCTTCAGACTTAACTCCAGAATATCTGGAGCAGCATGGACTTAAATCTGTTCCTAAATCTGTGGCCTATGGTTACACTGCTTCAGGATATGGATTTACTCAAGATATGCCTTATGCCTACCTTCATGAATTTACCAGAACGTCAATGGCCGGAAAAATTAGACGTTTTAAAGGTGGATATACAAGTCTTTGGCAGAAAATTGCAGAATCACTTCCTGTGAAACTTCACTGCAACACTGAAGTGTTGGCAGTCAGACGCAACTCTGACGGTGTCACTGTTAATGTCACGAATTTTGATGAAGTTAAAACTTTGGTTTTTGATAAGATTATAGTCTCGGGTTCCTTTCCATTAAAATATGGAAGAACGTACAGATTACTGCCTTCAGCTTGCAAAGAGCACGAAACGGAAGTAATGGATACAAGTGATCTTGAGAAGGATTTGTTCAGCAAAGTAGAGACCAATGACTACTACACCACCGTTTTAAAGATTAAAGGGCTAGAAGATATGCCTGTTGGATTTTATTATTTTAGTGAATTTATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCATTGCAGAAATTCTATGCTGACACTAACATATTCTTGCTATGGTCCTATGGCAATTCTGTTGACATTAAGGGACCCACTGTTACTGAGCTTGCGATCAACACAATAGAAACCATGGGGGGAGAAGTTGAGAATGTCATTCTTCAACGCCGTTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAAAGATGGATTCTATGATAAATTGGAATTAGAACTACAAGGTTCAAGGAATACTTACTATGTGGGTGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTAATCTGCAAGAACTTTGCAAATAGCAATGATTTGCCAATGTTTCCTTACATTAAGAGTTTGTTTCCCTTGCAAACGGAGTGCAGGGATCCTAAAGAATTAGGTGAATTGCCAGGAGTGCAATTTCCTAATTTTCCTACTTTGAATGGCTATTTGAAGTACTGGGGAACTCATCCAATCACACAAAACAGAACTCTTTATACCTGGATCAATGAAGAAGGGGCAGCGATATGCCAGAGGACCTTCGGAGAACTTCATTCATATGCCTCTTGCATTGCTCATAAGCTCTTAACAAGCCAAAAGCCGGTTATCAAGCCTGGAGATAAGGTTCTACTGGTCTATGTCCCTGGCCTGGATTTCATTGATGCCTTCTTCGGATGTCTACAAGCTAAAGTCTTACCAGTCCCTGTTCTTCCCCCAGATCCCATGCAAAGAGGCGGACAAGCACTTATTAAGATTGAAAATATTGCTAAATCATGTGGCATAGTGGCAATTTTATCAACAACAGCTTATCACTCAGCAGTCCGTGCAGGTTCAGTGAAACATTTAATCTCATTAACGGGAAAAAATGGGAAATCCTCAGCTCGATGGCCTAATCTTCCATGGCTGCACACTGATTCTTGGGTCAAGAACTCCAAGAGTTCGATTTTGCAATGTCTAGCTGATCAATGTGAACCTCAGCCTAATGATATCTGTTTCTTGCAATTTACGTCAGGTTCGACTGGTGATGCTAAGGGAGTAATGATAACTCACGGTGGGCTTGTTCACAATGTGAAGTTGATGAGAAGACGATACAAAAGCACCTCAAGGACAATACTAATAAGCTGGCTTCCTCAGTATCATGATATGGGGCTGATTGGAGGACTTTTTACATCTCTTGTTAGCGGTGGTAAAGCAGTTCTGTTTTCCCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAATTATCAGCAAGTATCAAGCAACTCACAGTGCTGGTCCTAACTTCGCTTTTGAGTTAGTGATTCGAAGACTAGAGTCTGATAAGGATAAGCTCCAGAATTTAGACCTTTCGTCCATGACTTTTCTTATGGTTGCCGCTGAACCAGTAAGACAGAAGACTCTGAAAAGATTTATTGAGCTAACTAGTCCTTTCGGCTTATCTCAGAAGGTGATGGCTCCTGGATACGGCTTAGCAGAAAATTGTGTGTTCGTCAGCTGTGCATTTGGAGAAGGTTACCCAATTTTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGGTATGTTCAACCAGATGATACAGATGTTGACATTAGAATAGTTGATCCAGAGACTGGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATCTGGATTAGCAGTCCAAGTGCAGGAATAGGATACTGGGGAAGGGAAGAACTGAGTCAGAAAACTTTCAGGAATGAGCTTCAGAATCATCCCGGACGACACTACACAAGAACTGGAGACCTGGGACGCATAATAGATGGAAAGCTGTTCATCACTGGGAGAATCAAGGATCTTATCATCGTTGCTGGAAGAAATATTTACTCAGCAGACGTTGAAAAAACAGTTGAGAGCTCATCTGAATTTCTTCGTCCCGGGTGCTGTGCTGTCATTGGGGTCCCGGAGGAGACTTTATCAGCGAAAGGGGTCTCCATTCCGGATGGCTCTGACCAAGTTGGCCTCGTTGTGATTGCAGAAGTAAGGGATGGTAAACCAGTTGGCAAAGATGTGATCGAGAAAATTCAAAATCGTGTGGCGGAAGAACATGGAGTCAGTGTCGCTTCTGTCAAGTTGGTCAGGCCCAGAACCATCAGCAAAACAACATCAGGAAAGATCAAGAGATTTGAATGTTTGAAACAGTTTACAGATGGAACACTGAACTTGGCACCGCAACCTATTGTGACAAAAAAATCATTGGTACGATCATTTACTACAGGAACATGTAGAGAAGGAAATACACCCCGACCCCAACTGGTGAGAAAACCTCTACCCAGTCTAAGAATCAGTAACAAGGAAATTGTGGAATTCTTGAGAGGGCTTATTTCTGAGCAGACTGGTATCCCAATCAACAATATCTCAGTCAACGACAACCTAACATCCTATGGAATGGACTCAATTGGTGTGGTTAGGGCAACACAAAAGCTATCCAATTTCCTGGGAGTGACAGTTGCGGCTATAGATGTCTTCACTGCGTCCTGCATTCTTGAGTTGGCTAACTTCTCAGAGAATCTTCTATTGAAATCTCAACCTCAGGTTATGAGCAATACATTCGATGTTCCAGAACTTGAGATTGATTCCACTGATTTCGTTGTGGATGTACCCAAATTTCGCCAATTTGGTATCATATTCCTTCAGCTCCTAGCACTCATTTATATGTCTATCATACTAGCTTTTCCTGCTTATCTATCCATCACTGCTTTTCTGGGTTTCATCCTAGGTGTCAGTAAATCAGTATATGGATTTCCCTGGTCGAATTATTTGATTTCCTTAACTTTGGCACCCCTTGCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCATTATTCGGAACTTCTTTCTTGAGGCCAAATTATGCCCTTACCCCTGAAATCTCCATCTATTCTATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAATCCAAGAAATTTCTTCTAAAGTTCTGGCAATACATCTCAGAGGAACAGTGTTCCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTCGGTTTTGCTGGATACAATTGACATCACAGACCCTTCTCTGGTTTCGATTGGAGATGAAGTTGTCATTGCAGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGACATCTAAGTTTCCTCCCTATTAGAATCGGCAAAAACTCTTCAATTGGACCTTATGCCGTTATACAAAAAGGCAGTGTTATTGGAGAAGGCACTGAGGTACAGCCTATGCAAAAGGTTGAAGCGGGCCGGCATGCGCTCAAAGAAGCAAAGCTAAATAATGTTGATAAGAATTCAATCCTGCCCGTTGATACCAGTAAAACTCAATCTGATGCGATCTACCATTTTGTGGGGATCTATCTAGTTGGCTTTCTCAATTCCCTTGCTGCAGCTATTGTCTACTTCCTATATATAAGGTTCTTCCAGAAACCCCCATCATTCCAACACTTCTCCTTTGTTTGCCTATGTGGGGCCTTCCACTGGATCCCGTTTACCGTCGTTGCATATGCTACCATGTTTTCTTATGTCCCATCAAATCCCATAACCTTTACCATTTCATTTTCTTGCGCCTACTTGCTTCATGGTCTAATACTCAGCTCTCTCACTTGTTCTTTGACCCGCCTCCTTGCATCCAGTCAAAAGCAAACTCAGTTTAAAATTTGGCTTCAGCATCGAATAAACATTGCCTGGCACCTTAGATTTGCAAAGCTTCTATCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGAAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCCAACCCAGAACTGATGTCGATTGGTGCTGGTGTCCATCTTGGTGATTTTAGCCGGATAGTTACTGGGTTCCACTCTTCCAATGGTTACGTCCGTGGAAAAGTTAAGGTTCAGGATAATTCAGTTATTGGGAGTCAAAGCCTAATTCTTCCTGGCTCTGTTGTTCAAAAGAATGTCATTCTGGGTGCACTTTCAGTCGCTCCAATGAACTCTACACTCCAAGAGGACGGTGTCTACATTGGATCTAAAACTCTAGTGGCTGTCAGAAACTCTGTAAATGCTTTAGATGAACGGATAGAGGAGATGGATGCGGAATACAAGAAATTAGTATCTAATTTGGCTGCAAATTTGGCTGCCACAACCCTGAAGGCTAAAGCAAGATATTTTCATCGCATTGGTGTTTGCGGAAAGGGATACATGAAAATATATGACAAAATTGAGGGTTTTCCACTGCACAAGATTTTTCACCCTGGAAAGAGCTACCCTGTCCTTGTTAGGCACAGCAACAGCTTGAGTGCTGATGATGATGCAAGGACTGACGCACGTGGTGCAGCTTTGAAGATATTTTCTGATGGACCTGCATCTGACCGTCCTCTCTTTGACTTAACACTGAAAACAGGCAAGGCATTTTATGCTCGCACCATTGCTGATTTTGCAAACTGGCTTGTTTGTGGGCTTGCAGCAAGGGAGGAGCTCGTCAAGCGTGTCCCACATGTCCGTGAAGCAGTGTGGGATTCTCTTCGACAGGCAGATTCATATGCTAAGTTACATTACTACTCAAACATTTGCAGGCTAGTCCGCTTCACAGACGGACAGGAAATGTATGTCAAATTTAAGTTACGGCCTTATGACAAAAGTATCAGCGAGGATACAGGTAAGGTGGAGCCAACTGGGATCCTTCCACCGGAGACAGGTGCAATTCCTAGGGATGAAAATGATGCACGCCCTTTACTTTTCCTTGCTGATGATTTTCAACAGCGTGTGAATTCTCCTGGTGGAGTTCAGTATGTTTTCCAGATGCAACTCCGAACAGTTCCAGATGATGAAGCCACCCGTGACAATGTACTAGACTGCACTAGACCGTGGGACGAAAATGAGTTTCCCTATACTGACGTTGGAGAGATCAATATCAATCAAATACTTTCTAAGGAAGAATCAGATAGACTAGAATTTAATCCCTACCTCCGAAGCCATGAACTGGATGTCATCAGTGCTGCTTCAAGCTCCCAAAGTGCTTCAGTTGATCATGGCCGTTCATTGATCTATGATGTTAGCCAGCATTTAAGAAATAGAATGCCACTCCCAGAGGCCTTAAGGATCTTTATAGAGCAAGCTGATGTGAATGTAGACCTGTCGAGTTGTCCCCTGGCAGCTACATTGCATAAAAAGGACTCGCAAGAAGTGACCTTGACCAGAACATGGTATCAGACCTTCTTCGCACTTTTCATTCAGCCGTTACTGCAAACAGTTATACCTTATGCGGTGGTGGGTTTAGCAATTGTAGCTCCTTTGAACTGGGTTATTTACCTAAAGAATGCGAAGAAACTGCCGCTCCATTGGTTGCTCCCCCTGTTTTGGATTCTCTCAGGTGCTCTGGCTGCATTGGGGTGTGTTATAGCCAAGTATGTGCTCGTGGGAAGGAAGAAAGTAGGTGAGACAGTGGCTATATGGAGTAAAAGGGTAGTTATGGATAGCACATGGCAGGCCATTAGAACTGTGGTTGGAGATTATTTTATGGACATGGCGGGTGGGTCCTTTTTGCTTGTGTTGTGGATGAAGCTGATGGGTGCAGACGTAGATATGGACCGTGCTGCTTACGTAGACAGCATGGGAGTATTATTAAACCCAGAAATGGTGAGGATAGGGAAAGGGGGTAGTGTAGGGAGAGAAGCCTTGCTCTTTGGACATATATATGAAGGTGAAGGGGGGATGGTGAAGTTCGGAGAGATCAAAATCGGAGAAGACGGGTTTGTGGGGAGTAGAGCCGTTGTGATGCCCGGTGTGCAAGTGGAGAATGAGGGTAATCTGAGTGCTCTTTCTCTCGCCATGAAAGAAGAAATCATTAGGTCTAGATAA 7269 0.4302 MYATTAPLSRTLLYFSTWSNPMHSMRELRCMFHCHLAYSSLLLYADCGIAITGSGIGLWRFIFCTVEPLSETEGLDDVCIQLQLMVVGLSLSTNLYRFRRQRALNSEQMDPLRSIEDQFSKLHPSFPVNTRIGIVGAGPSGLSAAYALSRLGYENVTVLEKYHTVGGMCESVEIDGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDRSTGKYQDIKVADDYVSVMSLTLEIQEKVKNSGRIGVHAISELASDLTPEYLEQHGLKSVPKSVAYGYTASGYGFTQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPVKLHCNTEVLAVRRNSDGVTVNVTNFDEVKTLVFDKIIVSGSFPLKYGRTYRLLPSACKEHETEVMDTSDLEKDLFSKVETNDYYTTVLKIKGLEDMPVGFYYFSEFMEDPSTIGNPVALQKFYADTNIFLLWSYGNSVDIKGPTVTELAINTIETMGGEVENVILQRRFKYFPHVSSQDMKDGFYDKLELELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSNDLPMFPYIKSLFPLQTECRDPKELGELPGVQFPNFPTLNGYLKYWGTHPITQNRTLYTWINEEGAAICQRTFGELHSYASCIAHKLLTSQKPVIKPGDKVLLVYVPGLDFIDAFFGCLQAKVLPVPVLPPDPMQRGGQALIKIENIAKSCGIVAILSTTAYHSAVRAGSVKHLISLTGKNGKSSARWPNLPWLHTDSWVKNSKSSILQCLADQCEPQPNDICFLQFTSGSTGDAKGVMITHGGLVHNVKLMRRRYKSTSRTILISWLPQYHDMGLIGGLFTSLVSGGKAVLFSPMTFIKKPLLWLEIISKYQATHSAGPNFAFELVIRRLESDKDKLQNLDLSSMTFLMVAAEPVRQKTLKRFIELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGYPIFVDWQGRVCCGYVQPDDTDVDIRIVDPETGEELQEDGKEGEIWISSPSAGIGYWGREELSQKTFRNELQNHPGRHYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEETLSAKGVSIPDGSDQVGLVVIAEVRDGKPVGKDVIEKIQNRVAEEHGVSVASVKLVRPRTISKTTSGKIKRFECLKQFTDGTLNLAPQPIVTKKSLVRSFTTGTCREGNTPRPQLVRKPLPSLRISNKEIVEFLRGLISEQTGIPINNISVNDNLTSYGMDSIGVVRATQKLSNFLGVTVAAIDVFTASCILELANFSENLLLKSQPQVMSNTFDVPELEIDSTDFVVDVPKFRQFGIIFLQLLALIYMSIILAFPAYLSITAFLGFILGVSKSVYGFPWSNYLISLTLAPLAWILCMVSTCICISLFGTSFLRPNYALTPEISIYSMDFVKWWALYKIQEISSKVLAIHLRGTVFLKYWFEMLGARIGSSVLLDTIDITDPSLVSIGDEVVIAEGVLVQSHEVKNGHLSFLPIRIGKNSSIGPYAVIQKGSVIGEGTEVQPMQKVEAGRHALKEAKLNNVDKNSILPVDTSKTQSDAIYHFVGIYLVGFLNSLAAAIVYFLYIRFFQKPPSFQHFSFVCLCGAFHWIPFTVVAYATMFSYVPSNPITFTISFSCAYLLHGLILSSLTCSLTRLLASSQKQTQFKIWLQHRINIAWHLRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGAGVHLGDFSRIVTGFHSSNGYVRGKVKVQDNSVIGSQSLILPGSVVQKNVILGALSVAPMNSTLQEDGVYIGSKTLVAVRNSVNALDERIEEMDAEYKKLVSNLAANLAATTLKAKARYFHRIGVCGKGYMKIYDKIEGFPLHKIFHPGKSYPVLVRHSNSLSADDDARTDARGAALKIFSDGPASDRPLFDLTLKTGKAFYARTIADFANWLVCGLAAREELVKRVPHVREAVWDSLRQADSYAKLHYYSNICRLVRFTDGQEMYVKFKLRPYDKSISEDTGKVEPTGILPPETGAIPRDENDARPLLFLADDFQQRVNSPGGVQYVFQMQLRTVPDDEATRDNVLDCTRPWDENEFPYTDVGEININQILSKEESDRLEFNPYLRSHELDVISAASSSQSASVDHGRSLIYDVSQHLRNRMPLPEALRIFIEQADVNVDLSSCPLAATLHKKDSQEVTLTRTWYQTFFALFIQPLLQTVIPYAVVGLAIVAPLNWVIYLKNAKKLPLHWLLPLFWILSGALAALGCVIAKYVLVGRKKVGETVAIWSKRVVMDSTWQAIRTVVGDYFMDMAGGSFLLVLWMKLMGADVDMDRAAYVDSMGVLLNPEMVRIGKGGSVGREALLFGHIYEGEGGMVKFGEIKIGEDGFVGSRAVVMPGVQVENEGNLSALSLAMKEEIIRSR 2422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0113 2422 SUPERFAMILY Acetyl-CoA synthetase-like 610 1184 - -
Glsi04g0113 2422 ProSitePatterns Phosphopantetheine attachment site. 1255 1270 IPR006162 -
Glsi04g0113 2422 SUPERFAMILY Trimeric LpxA-like enzymes 1458 1538 IPR011004 -
Glsi04g0113 2422 SUPERFAMILY FAD/NAD(P)-binding domain 129 379 IPR036188 -
Glsi04g0113 2422 Gene3D - 131 554 IPR036188 -
Glsi04g0113 2422 ProSiteProfiles catalase family profile. 1789 2422 IPR018028 GO:0004096|GO:0006979|GO:0020037
Glsi04g0113 2422 Gene3D Hexapeptide repeat proteins 1462 1562 - -
Glsi04g0113 2422 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 239 2180 - -
Glsi04g0113 2422 Gene3D - 1219 1299 IPR036736 -
Glsi04g0113 2422 ProSiteProfiles Carrier protein (CP) domain profile. 1226 1300 IPR009081 -
Glsi04g0113 2422 PRINTS Adrenodoxin reductase family signature 155 168 - -
Glsi04g0113 2422 PRINTS Adrenodoxin reductase family signature 131 153 - -
Glsi04g0113 2422 SMART Phosphopantetheine attachment site 1229 1300 IPR020806 GO:0031177
Glsi04g0113 2422 ProSitePatterns Putative AMP-binding domain signature. 786 797 IPR020845 -
Glsi04g0113 2422 Gene3D Hexapeptide repeat proteins 1697 1817 - -
Glsi04g0113 2422 SUPERFAMILY Heme-dependent catalase-like 1851 2162 IPR020835 GO:0020037
Glsi04g0113 2422 Gene3D Catalase core domain 1818 2168 - -
Glsi04g0113 2422 Gene3D - 411 504 - -
Glsi04g0113 2422 Gene3D - 1059 1187 IPR045851 -
Glsi04g0113 2422 SUPERFAMILY Trimeric LpxA-like enzymes 2229 2415 IPR011004 -
Glsi04g0113 2422 Gene3D Hexapeptide repeat proteins 2315 2415 - -
Glsi04g0113 2422 Gene3D - 589 1058 IPR042099 -
Glsi04g0113 2422 Gene3D - 202 310 - -
Glsi04g0113 2422 SUPERFAMILY ACP-like 1224 1303 IPR036736 -
Glsi04g0113 2422 Pfam Phosphopantetheine attachment site 1231 1295 IPR009081 -
Glsi04g0113 2422 SUPERFAMILY Trimeric LpxA-like enzymes 1707 1811 IPR011004 -
Glsi04g0113 2422 Coils Coil 1816 1843 - -
Glsi04g0113 2422 Pfam Flavin containing amine oxidoreductase 140 375 IPR002937 GO:0016491
Glsi04g0113 2422 Pfam AMP-binding enzyme 631 1064 IPR000873 -
Glsi04g0113 2422 CDD FAAL 615 1178 IPR040097 GO:0008610
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0113 Glsi-ChrGlsi04 870768 879590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0113 781 1177 Monolignol Biosynthesis Gene Families AT1G20480 26.799 2.68e-22 102