Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0078 ATGGCGTTGAACAATGGCGTCCCCAACACCGGTAAGGGCCTCATCGTCAGCTTCGGTGAGATGCTGATCGATTTCGTTCCCACCGTCTCCGGCGTTTCTTTGGCAGAGGCACCCGGCTTTCTCAAAGCTCCCGGCGGTGCTCCCGCCAACGTAGCCATAGCTGTGTCCAGGCTCGGTGGCCAATCCGCCTTCGTCGGAAAGCTTGGTGACGATGAGTTTGGTCACATGCTCGCCGGGATCTTGAAGGAAAACGGCGTCAGATCCGACGGCATCTCCTTCGACCAGGGCGCTCGTACTGCCTTGGCCTTCGTCACCCTACGCGCCGACGGCGAGCGTGAGTTCATGTTCTACAGAAATCCAAGCGCCGACATGCTCCTCAAGCCCGAACAGCTCAATCTTGAACTTATCAGATCCGCTAAAGTTTTCCATTATGGATCGATAAGCTTGATCGTGGAGCCATGCAGATCGGCACATCTGAAGGCAATGGAAGTTGCCAAAGAAGCTGGTTGCCTGCTTTCTTATGATCCAAACCTCCGGTTGCCATTGTGGCCTTCGCCTGAGGAGGCCCGTCTGCAAATAATGAGTATATGGGAAAAGGCAGATGTGATCAAGGTGAGTGATGTGGAGCTGGAGTTCCTAACAGGGAGTGATAAAATTGACGATGCTTCAGCTCTGTCATTGTGGCACCCCAATTTGAAGTTGCTCCTCGTGACTCTTGGTGAACACGGTTCCAGATACTACACCAAGAATTTCCAGGGATCCGTGGAGGCCTTTCATGTCAATACAGTTGATACAACTGGCGCTGGTGATGCCTTTGTGGGTGCCTTACTGGGCAAGATTGTAGATGATCAATCCATACTTGAAGATGAACCAAGGTTGAGAGAAGTACTCAAGTTCGCAAATGCATGTGGAGCAATTACAACTATTAAAAAGGGAGCAATCCCAGCTCTTCCCTCAGAGGCTGATGTCCTCAACCTGATCAATGGGGCATAG 993 0.5176 MALNNGVPNTGKGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGQSAFVGKLGDDEFGHMLAGILKENGVRSDGISFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEQLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARLQIMSIWEKADVIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGEHGSRYYTKNFQGSVEAFHVNTVDTTGAGDAFVGALLGKIVDDQSILEDEPRLREVLKFANACGAITTIKKGAIPALPSEADVLNLINGA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0078 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016301
Glsi04g0078 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Glsi04g0078 330 PANTHER HEXOKINASE FAMILY MEMBER 14 325 - -
Glsi04g0078 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Glsi04g0078 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Glsi04g0078 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Glsi04g0078 330 FunFam Probable fructokinase-2 12 330 - -
Glsi04g0078 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016301
Glsi04g0078 330 Gene3D - 12 330 IPR029056 -
Glsi04g0078 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Glsi04g0078 330 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0078 Glsi-ChrGlsi04 623162 626483 Proximal