Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0067 ATGTGTTCGTGCATTGTTGTCTATCTATCAATCTATTTCGTGCCTGTTATACTTCTTGCATCTGTTGTCTTGCGACTACAGCTTCAAGCATCGAGGGGTTTTGGAGCTATTGGACTATCAGTAAGAATACATCAAGGCCTTAAAGTCTTAGGACTCTCCATGGATAATGACAAATGCTCCAGTTACGGTGGAGGTTTCCCACCGCCTTCGGGACGTTATTCAGGTTTCTCACCCACCGGAAGCTCTTTCAACGTGAAACCAGAACCATCCTCATCATCATCTTATCATTCACTGGTCCCGGGCACCAGCTCAGACTCTGGTCACTTTGGACACGGAATGTCCGTAGACTCTAGTCACTATAGTCATGATATTAGCAGAATGCCTGATAATCCTCCGAGAAATAGGGGTCACAGACGTGCCCATTCTGAGATTCTCACCCTCCCGGATGATATCAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCCGATGGGCCCTCGTTTTCAGATGACACTGAGGAAGACTTATTATCGATGTACCTTGATATGGACAAATTCAACTCATCCTCTGCCACTTCAGCATTTCAAGTGGGCGAGCCATCTACAGCTTCGGCACAAATATCAGCACCAGCATCAGGGGCAGCCACCTCTTCTGCTGAGAACGTTGCTATTGGTACTAACGAAAGGCCCAGAGTTAGGCACCATCATAGTCAGTCCATGGATGGCTCGTCAACCATCAAACCAGAGATGTTAGTCTCAGGATCAGAAGATATTTCTGCAGCTGATTCCAAAAAATCTATGTCAGCTGCCAAACTAGCAGAACTCGCGCTAATTGACCCTAAACGTGCAAAGAGGATATGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAGGTGCAGACCTTGCAAACAGAAGCAACATCTTTGTCTGCTCAATTAACTCTCTTGCAGAGAGATACAAATGGGCTGACTGCTGAGAACAGTGAGCTGAAGCTGCGGCTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCTTTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAATTACTAACTGGGCAAGCAATGACCAATGGAGGACCTATGATGAATTTTGCTTCGTTTGGAGGAGGCCAGCAATTCTATCCCAACAACCAAGGCATGCACACTCTCTTAGCAGCACAACAGTTTCAACAGCTCCAGATACATTCTCAAAAGCAGCAGCAGCAGCAGCAGCAGCGGCTCCAGCAACATCAACTCCATCAACTTCAGCAGCAGCAAACAGGGGAATTGAAAATGAGAGGATCTACACCTTCCCCAGGTCCCAATGATACTTCATCAGATGGAAATCCCTCGGCAGCTAATGATTGTTGA 1419 0.4658 MCSCIVVYLSIYFVPVILLASVVLRLQLQASRGFGAIGLSVRIHQGLKVLGLSMDNDKCSSYGGGFPPPSGRYSGFSPTGSSFNVKPEPSSSSSYHSLVPGTSSDSGHFGHGMSVDSSHYSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAFQVGEPSTASAQISAPASGAATSSAENVAIGTNERPRVRHHHSQSMDGSSTIKPEMLVSGSEDISAADSKKSMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLLTGQAMTNGGPMMNFASFGGGQQFYPNNQGMHTLLAAQQFQQLQIHSQKQQQQQQQRLQQHQLHQLQQQQTGELKMRGSTPSPGPNDTSSDGNPSAANDC 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0067 472 FunFam probable transcription factor PosF21 280 333 - -
Glsi04g0067 472 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 71 445 - -
Glsi04g0067 472 MobiDBLite consensus disorder prediction 424 472 - -
Glsi04g0067 472 MobiDBLite consensus disorder prediction 122 139 - -
Glsi04g0067 472 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Glsi04g0067 472 Gene3D - 280 333 - -
Glsi04g0067 472 Pfam bZIP transcription factor 281 335 IPR004827 GO:0003700|GO:0006355
Glsi04g0067 472 Coils Coil 421 441 - -
Glsi04g0067 472 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Glsi04g0067 472 MobiDBLite consensus disorder prediction 77 139 - -
Glsi04g0067 472 Coils Coil 297 366 - -
Glsi04g0067 472 MobiDBLite consensus disorder prediction 77 111 - -
Glsi04g0067 472 SUPERFAMILY Leucine zipper domain 281 332 IPR046347 GO:0003700|GO:0006355
Glsi04g0067 472 CDD bZIP_plant_RF2 282 331 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0067 Glsi-ChrGlsi04 580051 584705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0067 72 409 bZIP Transcription Factor Family AT1G06070 72.485 3.27e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi04g0067 bZIP_1 1.2e-08 CL0018