Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0058 ATGGGTGTGGCTATCCCTGTCCCAGTAGTAATGGTGGCAGTTGCGGTAGTGGTGACTGTGAGCTTGTATGATAGTCCCCTCCACCTAGTGGAAGCAGCCACGGGGGTTCCACCATCAAAGTTGCAGTGGCATTACTACAAGCTGCACAATACATGCCGTGACGCAGAGGTGTATGTGAGGCACCAAGTGAAGCTCTTTTGGGACCAAGACAAAAGCATTACCCCGAAGCTCCTCCGCCTGCTCTATTCTGACTGTTTTGTCACTGGGTGTGATGCATCAATTCTGCTGGATGGACCAAATTCAGAGAAAAAATCACCACAAAACAGGGGGCTAGGAGGATTTGTAGTGATTGACAAGATCAAAACCGTTCTTGAAGATCGATGCCCAGGAGTTGTCTCCTGTGCTGATATACTCCACCTTGCCACCAGGGATGCTCTTAAATTGGCAGGTGCACCAGCTTATCCAGTTTTGACAGGACGAAAGGATGGCACCAAGTCAGATGCTGCATCAGTAGACCTGCCCTCACCATCCATCTCACGCCAGGAAGCTCAAGCATACTTCAAATCCAGGGGCTTAGATGTACTGGATATGGCAACACTCCTAGGAGCACACACAATGGGCACAACACATTGTAGCTTCATTGTTGATCGGCTGTACAACTACGAAGGCACTGGAAAGCCAGATCCAACCATGAATGCTACTTTTGTGGACACCATGAGAAAACTATGTCCACCAAGAAAGACTGGACAACCAGACCCACCGGTATACCTGAACCCACAATCTGGCTCTGGTTACAAATTTACAGTCTCTTACTACAAAAGGATCCAATCACATGAGGCTGTCCTTGGAGTTGATCAACAACTACTGTATGGTAATGACACTCAACAAATCACTAACGAATTTGCTGCTGGTTTCGAAGATTTTCGGAGATCTTTTGCTTTGTCGATAAGTCGGATGGGAAATATCAAAGTTTTAACAGGAAACCAGGGAGAGGTACGCCGTAACTGTCGATATACAAACAAGGGCCACCAAAATTAA 1038 0.4701 MGVAIPVPVVMVAVAVVVTVSLYDSPLHLVEAATGVPPSKLQWHYYKLHNTCRDAEVYVRHQVKLFWDQDKSITPKLLRLLYSDCFVTGCDASILLDGPNSEKKSPQNRGLGGFVVIDKIKTVLEDRCPGVVSCADILHLATRDALKLAGAPAYPVLTGRKDGTKSDAASVDLPSPSISRQEAQAYFKSRGLDVLDMATLLGAHTMGTTHCSFIVDRLYNYEGTGKPDPTMNATFVDTMRKLCPPRKTGQPDPPVYLNPQSGSGYKFTVSYYKRIQSHEAVLGVDQQLLYGNDTQQITNEFAAGFEDFRRSFALSISRMGNIKVLTGNQGEVRRNCRYTNKGHQN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0058 345 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PANTHER PEROXIDASE 25-RELATED 17 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 ProSiteProfiles Plant heme peroxidase family profile. 40 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi04g0058 345 Pfam Peroxidase 59 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 Gene3D - 45 340 - -
Glsi04g0058 345 CDD secretory_peroxidase 40 339 IPR033905 GO:0004601|GO:0042744
Glsi04g0058 345 Gene3D Peroxidase, domain 2 174 319 - -
Glsi04g0058 345 SUPERFAMILY Heme-dependent peroxidases 44 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi04g0058 345 FunFam Peroxidase 174 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0058 Glsi-ChrGlsi04 520598 521959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0058 30 340 Peroxidase AT5G24070 70.607 1.56e-168 471