Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0048 ATGGTGGTACCACTAAATATATGGGTTCTCATATCCAATTTTAAGTTGGCCTACAATCTTCTTCGTTGCCCTGATGGTACTTTCAACAGAGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCAGCCAATGCTGTTGATGGGGTTTTCCCTTTTGATGTTATCGTTGACTGTGAAACTAATCTCCTTATTACTATTAGAATATATCGATCAGCACAGGGAGAAGAGCCTCAAGTGAATATTGTTGACCTTGAGAAGCCTGTTGCAGCGAAACTGGTGGGGATTTGCAAGGCTGTTGTGGTCTCAGTGAGTTATAGACGCACACCAGAAAACAGATATCCTCATGCATATGATAATCGCTCAGGTGGAAACATTGCACACCACGTTTCCCTGAGAACTGTAGAAGCTGGAATTGATGTATTAGGGAATATACTGCTCAATCCATTGTTTGGTGGGCAAGAAAGAACTGAATCTGAGAAGCAATTGGATGGAAAATATTTTGCTGCGCTCAAAGACCAAGACTGGTATTGGAGAGCTTTTCTCGCAGAAGGGGAAGATAGAGACCATCCAGCAGACTGGCAGTTGGCTTATGTTAAAGGGCTTGAGAAAGCTGGGAAAGATGCGAAATTGCCATTCCTGGAGCAGTTGGCCTACAATCTTCTTCGTTGCCCTGATGGTACTTTCAACAGAGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCAGCCAATGCTGTTGATGGGGTTTTCCCTTTTGATGTTATTGTTGACTGTGAAACTAATCTCCTTATTAGAATATATCGATCAGCTCAGGGAGAAGAGCCTCAAGTGAATATTGTTGACCTTGAGAAGCCTGTTACAGCGGAAGTTCCTCCTCTGGTGGGGATTTGCAAGGCTGTTGTGGTCTCAGTGAGTTATAGACGCACACCAGAAAACAGATATCCTCATGCATATGATAATCGGTGGGCAGCTCTTAAATGGGTTAATTCTAGATTGTGGTTTCAAAGTAGGAAGGACAGGAAGGCTCACATTTACATGGCTGGAGGTAGCTCAGGTGGAAACATTGCACACCACGTTTCCCTGAGAACTGTAGAAGCTGGAATTGAAGTATTAGGGAATATACCGCTCAATCCATTGTTTGGTGGGCAAGAAAGAACTGAATCTGAGAAGCAATTGGATGGAAAATATTTTGCTGCGCTTAAAGACCGAGACTGTTATTGGAGAGCTTTTCTCACAGAAGGGGAAGATAGAGACCATCCAACAGTAACCCATTTAGCCCTAAGGGCAGAAATCTTGAAGGACTGGCAGTTGGCTTGTGTTAAAGGGCTTGAGAAAGCTGGGAAAGATGCGAAATTGCCATTCCTGGAGCAGGACCCTGCTCCTGTAATCTTTTACTTTTTGGTATTATATGTGTATGAGATTGGTTTGATCAGCATATAG 1434 0.4338 MVVPLNIWVLISNFKLAYNLLRCPDGTFNRDLAEFLDRKVPANAVDGVFPFDVIVDCETNLLITIRIYRSAQGEEPQVNIVDLEKPVAAKLVGICKAVVVSVSYRRTPENRYPHAYDNRSGGNIAHHVSLRTVEAGIDVLGNILLNPLFGGQERTESEKQLDGKYFAALKDQDWYWRAFLAEGEDRDHPADWQLAYVKGLEKAGKDAKLPFLEQLAYNLLRCPDGTFNRDLAEFLDRKVPANAVDGVFPFDVIVDCETNLLIRIYRSAQGEEPQVNIVDLEKPVTAEVPPLVGICKAVVVSVSYRRTPENRYPHAYDNRWAALKWVNSRLWFQSRKDRKAHIYMAGGSSGGNIAHHVSLRTVEAGIEVLGNIPLNPLFGGQERTESEKQLDGKYFAALKDRDCYWRAFLTEGEDRDHPTVTHLALRAEILKDWQLACVKGLEKAGKDAKLPFLEQDPAPVIFYFLVLYVYEIGLISI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0048 477 Gene3D alpha/beta hydrolase 1 118 IPR029058 -
Glsi04g0048 477 Gene3D alpha/beta hydrolase 120 213 IPR029058 -
Glsi04g0048 477 Gene3D alpha/beta hydrolase 214 463 IPR029058 -
Glsi04g0048 477 SUPERFAMILY alpha/beta-Hydrolases 242 451 IPR029058 -
Glsi04g0048 477 PANTHER ARYLACETAMIDE DEACETYLASE 293 455 - -
Glsi04g0048 477 SUPERFAMILY alpha/beta-Hydrolases 31 216 IPR029058 -
Glsi04g0048 477 Pfam alpha/beta hydrolase fold 292 424 IPR013094 GO:0016787
Glsi04g0048 477 Pfam alpha/beta hydrolase fold 120 192 IPR013094 GO:0016787
Glsi04g0048 477 Pfam alpha/beta hydrolase fold 82 118 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0048 Glsi-ChrGlsi04 450465 452855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0048 214 465 Carbohydrate Esterase AT3G05120 53.177 5.22e-98 297