Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0038 ATGGCTTCCTCTCCTTCGTCTCTGCTTCTTCCGCTTGGTTCTACTTCTGGTAAAAATCTGTTTTTCACTCCTCAAGGCATTTCAGATGACAAATTTCGTTGTCATTACCCAAGCTTAGATCTTAAAGTTAAGTCCCCAAAGACAAGAGAATGGACAGCTATGTTTAATACCATTACGCGTAGAGACTTTCTTGGGTTATCTTTCGGGGTCCCAAGCCTTTTAATGAATTCATTTGATGCCAAAGGAGCTGGTTTGCCCCCAGAAGAAAAGCCAAGGCTATGTGATGATACTTGTGAGAAAGAGCTTGAAAATGTGCCTATGATAACTACTGAGTCGGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGCTCTAGTCCACCAGTAGGATTTCAGGTGGCTGCTAACTATGTTGCGATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGCCATACATTTTTCGCGTTGGCTCTGGTCAGGTTATAAAGGGACTTGATGAAGGAATCCTGAGCATGAAAATAGGAGGAAAGCGCCGACTGTACATACCTGGATCATTGGCATTCCCAAAAGGCCTTACTTCGGCTCCAGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCAGGACTTGAAGTGGACGAGGAATAA 690 0.429 MASSPSSLLLPLGSTSGKNLFFTPQGISDDKFRCHYPSLDLKVKSPKTREWTAMFNTITRRDFLGLSFGVPSLLMNSFDAKGAGLPPEEKPRLCDDTCEKELENVPMITTESGLQYKDIKVGQGSSPPVGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKIGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLEVDEE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0038 229 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 81 222 - -
Glsi04g0038 229 FunFam Peptidylprolyl isomerase 102 220 - -
Glsi04g0038 229 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 130 218 IPR001179 GO:0003755
Glsi04g0038 229 SUPERFAMILY FKBP-like 95 218 - -
Glsi04g0038 229 Gene3D - 93 221 IPR046357 GO:0003755
Glsi04g0038 229 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 222 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0038 Glsi-ChrGlsi04 406832 409170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0038 111 218 Calmodulin-binding Proteins AT3G25230 38.532 2.25e-14 69.7