Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0021 ATGCTTATTTGCATATTTCTGTTGATAATTAAGGAATCCTGGAGAAGCTGCCTCCGTGCTTGTAATTGGGACAATTCCGTAAGAAACAGTAATGCTACTGGCATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCATTCACCACACCAAGGAGAAGGTAGTCAGCGATTCTGAAAAGAAGAACACAAAAGAAAAGAAAAAGAAAGGTCTAGGAAAACTAAGGCATGGAGAGACAAATTCATTCATTCCCCTCTTCAGAGAGCCAAGCAGCATTGAAAAAATCTTCGGGGACTTTGAAAGAGAGCAACAACTACTAACCGTCAGGCCTCCCACACCTCCTGAGCTACCCAAGACACCACCTTTTGCCCCTCCTAGAGCTCCTTCTCCTAGGGCTCCTTCTCCAAGGACTTCTTCTCCCAGGGCTCCTTCTCCTCGGGTTGCATCTCCCAGAGCTGCATCTCCCAGGATTGTTCATCACCACAAGGAGGTCAGCTACAGACCAGAACCAACGCTAAGGAACCACCATGCCTCAGCAACTAAGATTCAGGCTGCTTATAGAGGTTACATGGCTAGGAGGAGTTTTAGAGCTCTGAAGGGTCTGGTGAGGCTGCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAATGACTGCCATGAAATACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGGAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAATACAAGAATGATAAGGAAGTGGCAAGTACCCTGGGCAAGTTGACTTTAGGCCGTGCTTCTGAGGCAGGTAACCAAGATGAATGGGATGATAGCCTACTGACAAAAGAGGAAATAGAGGCCAGGCTGCATAGGAAAGTGGACGCAGTCATCAAAAGAGAAAGAGCAATGGCATATGCATATTCCCACCAGTTGTGGAAAGCCACTCCTACGTCAACTCCAACACCTCTGTCAGATATGCGATCGGGAGGCTTTCCATGGTGGTGGAACTGGTTGGAAAGACAATTGCCCACAGCAAATGCACAAGAAAGCCAGGTGTTGAAGAATTTTCAACTTACACCGCCTAGACCCTATTCAGAACAGAAGACTAGTCCGCGACCCACCTCAAGCACCCATAAGCAGCATCATTTTGGGTTTGATAACATGGACACAGCCACGCCAAAATCCACTAAATCAGCTATGCTGGCATCTGCAAAACCGGCAAGAACCCCACAAGCAAAAAGCTCAAACTTGCCAAAATATTCAAGAGCAAGGATGGGGGGAGGTGATTTACCTTTTGATATACCACTGAAGGATGACGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCAAACTACATGGTTCCAACGGTTTCTGCCAAGGCCAAAGTCCGTGGTAGTAGTAATCCAAGAGAAAGTTTTCCTGGGACTCCAAGCAGTGAATCAAAGAGGCGACTTTCATTTCCTCTGACACAAGGGATTGGGGCTTTTAAATGGACAAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGGTCCCAAAGGATGTTAGATAAAAATCAGTCAGTTCAATCTTTAGGAAACTTGAGTGTGGATTCGACGGTGTCTTTACCCACAGGGGTTGGAAGAAAGCCGTTTAACAGATTTGTGTGA 1671 0.465 MLICIFLLIIKESWRSCLRACNWDNSVRNSNATGMGKKGSWFSAIKRVFIHHTKEKVVSDSEKKNTKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLTVRPPTPPELPKTPPFAPPRAPSPRAPSPRTSSPRAPSPRVASPRAASPRIVHHHKEVSYRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMTAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASTLGKLTLGRASEAGNQDEWDDSLLTKEEIEARLHRKVDAVIKRERAMAYAYSHQLWKATPTSTPTPLSDMRSGGFPWWWNWLERQLPTANAQESQVLKNFQLTPPRPYSEQKTSPRPTSSTHKQHHFGFDNMDTATPKSTKSAMLASAKPARTPQAKSSNLPKYSRARMGGGDLPFDIPLKDDDSLTSCPPFSVPNYMVPTVSAKAKVRGSSNPRESFPGTPSSESKRRLSFPLTQGIGAFKWTKGSLFSSKDPRSQRMLDKNQSVQSLGNLSVDSTVSLPTGVGRKPFNRFV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0021 556 MobiDBLite consensus disorder prediction 363 388 - -
Glsi04g0021 556 MobiDBLite consensus disorder prediction 111 159 - -
Glsi04g0021 556 Pfam Protein of unknown function (DUF4005) 415 502 IPR025064 -
Glsi04g0021 556 MobiDBLite consensus disorder prediction 363 431 - -
Glsi04g0021 556 Pfam IQ calmodulin-binding motif 179 199 IPR000048 GO:0005515
Glsi04g0021 556 Gene3D - 176 229 - -
Glsi04g0021 556 ProSiteProfiles IQ motif profile. 178 206 IPR000048 GO:0005515
Glsi04g0021 556 PANTHER IQ-DOMAIN 5-RELATED 35 498 - -
Glsi04g0021 556 MobiDBLite consensus disorder prediction 470 492 - -
Glsi04g0021 556 MobiDBLite consensus disorder prediction 113 143 - -
Glsi04g0021 556 MobiDBLite consensus disorder prediction 56 77 - -
Glsi04g0021 556 SMART iq_5 177 199 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0021 Glsi-ChrGlsi04 304610 308431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0021 35 556 IQD Protein Family AT3G59690 53.846 2.27e-169 488