Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2217 ATGGACATCGACACCTGCGAGAGGAAGGATCCCTTGGCAATTGTAGAGCACATAAATGACATTTACAATTTTTACAAGAAGGCTGAGGTTCACTACAAAATTGAGCTTATGGAGGAGACGTTGTTCCTTACTGTCAATCTTATAGACAGGTTCTTGGAGCATCAGCCAGCGGTTAGAAAGAAGCTTCAGTTGATTGGTGTAACAACCATGCTAATAGCTTGCAAGTATGAAGAGGAAAAATTCACGGTGAAAACTTTACGGGTCAACTTATCTGTGCCTACCCCGTATGTGTTCATGAGGAGATTTCTTAAGGCAGTTCAATCAGACAAGAAGTTTTCGCCATCTTTGCTAGCTGCTGCAGCTATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAATGGACTAGAACCAGCGAGTGGTATACTAATTACTCGGAAGAGCAGCTTCAGTGA 456 0.4254 MDIDTCERKDPLAIVEHINDIYNFYKKAEVHYKIELMEETLFLTVNLIDRFLEHQPAVRKKLQLIGVTTMLIACKYEEEKFTVKTLRVNLSVPTPYVFMRRFLKAVQSDKKFSPSLLAAAAIYTAQCSLYQFKQWTRTSEWYTNYSEEQLQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2217 151 PANTHER CYCLINS 29 129 IPR039361 -
Glsi03g2217 151 SUPERFAMILY Cyclin-like 92 150 IPR036915 -
Glsi03g2217 151 Pfam Cyclin, C-terminal domain 111 151 IPR004367 -
Glsi03g2217 151 Gene3D - 112 151 - -
Glsi03g2217 151 Pfam Cyclin, N-terminal domain 29 81 IPR006671 -
Glsi03g2217 151 SUPERFAMILY Cyclin-like 10 80 IPR036915 -
Glsi03g2217 151 Gene3D - 83 111 - -
Glsi03g2217 151 SMART cyclin_7 19 107 IPR013763 -
Glsi03g2217 151 Gene3D - 29 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2217 Glsi-ChrGlsi03 82544441 82545633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2217 1 150 Core Cell Cycle Gene Families AT1G20610 42.667 6.09e-53 171