Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2205 ATGGGCGACAATGATATCGAACTACCAGGCTTCCGATTTCACCCCACTGAAGAAGAACTCCTCGATTTCTATCTCAAAAATGTGATCGTGGGCAAGAAGTTGCGTTTCGATATCATTGGTTTCCTCAACATTTATCACCATGATCCTTGGGACTTGCCTGGTCTGGCAAAGGTAGGAGAAAGAGAATGGTACTTCTTCGTCCCAAGAGACAAGAAGCATGGAAGTGGGGGAAGGCCTAACCGCACCACCGAGAAAGGGTTTTGGAAAGCCACGGGTTCTGACCGCAAAATCATAAGCTTATCGGAGCCAAAGCGGATGATAGGATTGAGGAAGACCTTGGTTTTCTATCAGGGAAGAGCTCCCCGTGGATGCAAGACCGATTGGGTTATGAATGAGTACCGCTTGCCTGACACTTCCCAATTCCCCAAGGACATCGTCTTGTGCAAGATATACAGAAAGGCTACTTCCTTGAAAGTGTTGGAGCAGAGGGCAGCCATGGAAGAAGAGATGAAGCAGTTGAGAGGTTCGCCTTCCTCTCCTCCTTCCACCTCCACAGACACCACCCTGCACCAGTATCAAAAACATGCGCTTCTCAAGGAAGAAGCAGAAGAAATATTTATGGAGTCGCAGGAAGACCACAAAACGACATGTAGTTCGTCGATCCAAACCGGGAAGGACAAGCTGCAACTGCAAATACCCATAATCGGCATGGACTGGACCCAAGATCCCTTGTGGACTCAAATTAATAGTCCTTGGTTGTCTAGTTTCACTCCTTACTCCAACATCCTTAATTTTTAA 798 0.4724 MGDNDIELPGFRFHPTEEELLDFYLKNVIVGKKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIISLSEPKRMIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDTSQFPKDIVLCKIYRKATSLKVLEQRAAMEEEMKQLRGSPSSPPSTSTDTTLHQYQKHALLKEEAEEIFMESQEDHKTTCSSSIQTGKDKLQLQIPIIGMDWTQDPLWTQINSPWLSSFTPYSNILNF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2205 265 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Glsi03g2205 265 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
Glsi03g2205 265 MobiDBLite consensus disorder prediction 168 187 - -
Glsi03g2205 265 FunFam NAC domain-containing protein 67-like 16 157 - -
Glsi03g2205 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 203 - -
Glsi03g2205 265 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Glsi03g2205 265 SUPERFAMILY NAC domain 8 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2205 Glsi-ChrGlsi03 82471481 82472372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2205 5 262 NAC Transcription Factor Family AT2G17040 59.712 1.85e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi03g2205 NAM 1.2e-33 No_clan