Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2201 ATGGCTAGGAAGTGGCAGAAACAGGCCATAAACAGAAGGAAGAGACTCCCAAGGCGTATAACAACAACTCAACAAGGTTGTAGGCCACCCGTCAGGGCAGAGAAGGGTCACTTTGTAGTGTACAGCACCGATAAGAGGCGCTTTGTGCTTCCCTTGCTCTATCTTAACCACAAAATCTTCAGGGAGCTGCTCAAATTGGCAGAAGATGAATTTGGGCTGTCTACCAATTTGCCCCTCACGTTGCCTTTTGAGGCCACAGTCATAGAGTACGTCATAATGCTGATCCAGAGAAAGTTTGTAACCATACACGACGTAGAGTGCAAGCTCCTCACTTGCTTTCATTCTAAAACCCAAAACCTGAACGTGATGAAGCTGCTGCGCTTTTGTTCCCTGTTGTGGCTATTGGGGTTGGTTAGTGCGGAGGATCCATATAGATTCTTCGACTGGAATATCACCTACGGCGACGTCTATCCCCTTGGGGTTAAACAGCAGGGCATTCTTATCAATGGCCAATTTCCAGGTCCCAATGTCTACTGTGTTACCAACGACAATTTGATCATCAATGTTCATAACAACTTGCCTGAACCTTTTCTTCTATCATGGAATGGTGTTCAGCAAAGAAGGAATTCTTATCAAGACGGAGTTTCTGGAACCACATGCCCCATCCCTCCTGGCAAGAACTTCACCTACAAACTTCAGGTGAAAGATCAAATTGGAAGCTTCTTCTATTTCCCTTCTCTTGCTTTCCACAAGGCTGCTGGTGGCTTTGGAGGTATCAAAATCCTGAGCAGGCCAAGGATTCCAGTCCCCTTCCCTGATCCTTCTGATGATTTCACCTTTCTCTTTGGAGATTGGTACAATATCAATCACAAGAAGCTGAAGGCCGTTCTAGATCGTGGTCACAGGCTTCCTTTCCCTCAAGCCCTTCTTATCAATGGTCGGGCAAACGGTACAACATTCACAGTTGAACAAGGAAAAACGTATAGGCTTAGAATATCAAATGTGGGGCTTCAAAACACTCTCAACTTCAGAATTCAAGGGCACAACATGAAATTGGTCGAAGTTGAGGGAACTCACACTGTGCAGACCACCTATTCCTCAATAGATGTTCATGTGGGACAGTCTTATTCGGTGCTTATCACAGCTGACAAGGCGCCTCAAGACTATTATATTGTAGTGTCCACTCGTTTTACTAAGAGAGTCCTCACCAGCACTGCCATTCTTCACTATAGCAACTCTCAACGATCTGTCTCTGGCCCAATTCCTGGTGGACCAACCACCCAGATCGATTGGTCTCTTCAGCAAGCTCGTTCAATCAGGACTAACCTTACTGCGAGTGGACCAAGGCCGAATCCACAGGGCTCTTACCACTATGGTCTTGTAAACATCAGCAGAACAATTATACTGGAGAGCTCAGCAGCTCAAGTCAATGGCAAGCAGAGATATGCAGTTAACAGCGTATCCTTCGTTCCTGCGGACACTCCTCTGAAACTAGCAGATTACTTCAAGATAGGGGGTGTTTTCAAAGTTGGAAGCATCCCAGATATCCCTTCTAGGAAACCAATGTATGTTGATACGTCAGTCATGGGTGCAGATTTCCGAGCCTTTGTGGAGATCGTGTTTCAAAACCATGAAAACATTGTTCAGAGCTGGCACATCGACGGGTACTCATTCTGGGTTGTAGGTATGGATGGAGGTGTGTGGACACCTGCTAGTCGTAACCAATACAACCTCAGAGATGCAGTTTCAAGGTGCACTACACAGGTATATCCCAAGTCATGGACTGCAATCTACATGGCACTAGATAATGTGGGAATGTGGAATGTGAGAAGTGAATTTTGGGCACGACAGTACCTTGGACAACAATTTTATATGCGAGTGTATTCACCGGTGGAATCCATCAGAGATGAATATCCAATTCCAAATAATGCTCTTCTATGTGGCAGGGCTGCAAGCAGAACAACCAGGCCACTAGGCGTATGA 1983 0.4584 MARKWQKQAINRRKRLPRRITTTQQGCRPPVRAEKGHFVVYSTDKRRFVLPLLYLNHKIFRELLKLAEDEFGLSTNLPLTLPFEATVIEYVIMLIQRKFVTIHDVECKLLTCFHSKTQNLNVMKLLRFCSLLWLLGLVSAEDPYRFFDWNITYGDVYPLGVKQQGILINGQFPGPNVYCVTNDNLIINVHNNLPEPFLLSWNGVQQRRNSYQDGVSGTTCPIPPGKNFTYKLQVKDQIGSFFYFPSLAFHKAAGGFGGIKILSRPRIPVPFPDPSDDFTFLFGDWYNINHKKLKAVLDRGHRLPFPQALLINGRANGTTFTVEQGKTYRLRISNVGLQNTLNFRIQGHNMKLVEVEGTHTVQTTYSSIDVHVGQSYSVLITADKAPQDYYIVVSTRFTKRVLTSTAILHYSNSQRSVSGPIPGGPTTQIDWSLQQARSIRTNLTASGPRPNPQGSYHYGLVNISRTIILESSAAQVNGKQRYAVNSVSFVPADTPLKLADYFKIGGVFKVGSIPDIPSRKPMYVDTSVMGADFRAFVEIVFQNHENIVQSWHIDGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSPVESIRDEYPIPNNALLCGRAASRTTRPLGV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2201 660 CDD CuRO_3_AAO_like_1 491 612 IPR034275 GO:0005507
Glsi03g2201 660 Gene3D - 459 656 IPR008972 -
Glsi03g2201 660 FunFam Monocopper oxidase-like protein 460 657 - -
Glsi03g2201 660 SUPERFAMILY Cupredoxins 271 450 IPR008972 -
Glsi03g2201 660 Gene3D - 275 448 IPR008972 -
Glsi03g2201 660 PANTHER MULTI-COPPER OXIDASE 162 626 IPR045087 -
Glsi03g2201 660 FunFam Monocopper oxidase-like protein 275 448 - -
Glsi03g2201 660 Gene3D - 144 265 IPR008972 -
Glsi03g2201 660 Pfam Auxin responsive protein 11 95 IPR003676 GO:0009733
Glsi03g2201 660 Pfam Multicopper oxidase 277 412 IPR001117 -
Glsi03g2201 660 FunFam L-ascorbate oxidase homolog 144 265 - -
Glsi03g2201 660 CDD CuRO_1_AAO_like_1 146 261 IPR034273 GO:0005507
Glsi03g2201 660 Pfam Multicopper oxidase 151 264 IPR011707 GO:0005507
Glsi03g2201 660 SUPERFAMILY Cupredoxins 137 291 IPR008972 -
Glsi03g2201 660 SUPERFAMILY Cupredoxins 460 649 IPR008972 -
Glsi03g2201 660 Pfam Multicopper oxidase 494 629 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2201 Glsi-ChrGlsi03 82444245 82448968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2201 9 103 Calmodulin-binding Proteins AT5G20810 32.323 7.06e-11 60.1