Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2184 ATGGGTGTGGAAGTAGATGATTGCTGCTCTCTAAAGTGGACAATCGTATTATGCGATCCCTGTTTATCCCTCCCCGTTGCCGTATCTCCTTCTTCGGATCAGCAAAAAGTTCAAAAAATGGGTGTTGCTGAAAACATTCACGATATGGAGGAGGGAACCTTGGAGATAGGAATGGAATACAGAACTGTATCTGGCGTTGCTGGACCGTTGGTCATTCTTGATAAAGTTAAGGGACCCAAATATCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTCGCCGCGGGCAAGTTCTAGAAGTTGATGGCGAAAAGGCTGTTGTTCAGGTCTTTGAAGGTACATCTGGGATTGACAATAAATTTACAACTGTGCAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCCCTTGACATGCTTGGCCGAATATTTAATGGTTCTGGGAAACCAATTGATAATGGTCCACCCATTTTGCCAGAGGCGTACTTGGATATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCGGAGGAGATGATACAGACAGGAATATCGACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATTCCTCTTTTCTCAGCTGCTGGTCTTCCCCATAATGAGATTGCTGCTCAAATATGTCGTCAGGCTGGCTTAGTCAAGCGATTGGAGAAATCTGATAATCTTCTTGAGGGTGGGGAAGAGGACAATTTTGCCATTGTGTTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTTAAGCGAGACTTTGAGGAGAATGGCTCAATGGAGAGAGTGACCCTTTTTCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATCACTCCTCGTATTGCTCTTACTACTGCTGAATATCTGGCATATGAATGTGGGAAGCATGTTCTCGTGATACTCACTGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCGCGAGAGGAAGTACCAGGAAGGCGTGGGTATCCTGGTTATATGTATACAGATCTTGCAACAATCTATGAACGTGCTGGAAGAATTGAGGGACGAAAAGGCTCTATTACGCAAATTCCAATTCTAACCATGCCAAATGATGACATTACACATCCAACTCCTGATCTTACTGGATATATTACTGAGGGGCAGATATACATTGATAGACAGCTGCATAACAGACAGATATACCCACCAATCAATGTCCTCCCATCACTGTCTCGGTTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGAAGGGATCATTCTGATGTGTCCAACCAGCTCTATGCTAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAAGATCTGCTGTATCTGGAATTTTTGGACAAGTTTGAGAGGAAATTTGTTGCCCAAGGAGCTTACGACACCCGCAATATCTTTCAGTCACTAGATCTTGCATGGACATTGCTTCGGATTTTCCCCCGTGAGCTTCTTCACCGTATACCAGCAAAGACACTTGATCAATATTATAGTCGGGATGCTGGTAATTGA 1584 0.4331 MGVEVDDCCSLKWTIVLCDPCLSLPVAVSPSSDQQKVQKMGVAENIHDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAGN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2184 527 PIRSF V-ATPsynth_beta/V-ATPase_B 50 527 IPR022879 -
Glsi03g2184 527 Gene3D - 68 526 - -
Glsi03g2184 527 NCBIfam V-type ATPase subunit B 59 525 IPR005723 GO:0033180|GO:0046961|GO:1902600
Glsi03g2184 527 Hamap V-type ATP synthase beta chain [atpB]. 57 525 IPR022879 -
Glsi03g2184 527 CDD ATP-synt_V_A-type_beta_C 426 520 - -
Glsi03g2184 527 FunFam V-type proton ATPase subunit B, brain 68 527 - -
Glsi03g2184 527 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 186 416 IPR000194 GO:0005524
Glsi03g2184 527 CDD ATP-synt_V_A-type_beta_N 59 130 - -
Glsi03g2184 527 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 44 524 IPR022879 -
Glsi03g2184 527 ProSitePatterns ATP synthase alpha and beta subunits signature. 407 416 IPR020003 GO:0005524
Glsi03g2184 527 CDD V_A-ATPase_B 131 424 - -
Glsi03g2184 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 422 IPR027417 -
Glsi03g2184 527 Pfam ATP synthase alpha/beta family, beta-barrel domain 63 129 IPR004100 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2184 Glsi-ChrGlsi03 82319716 82325685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2184 39 527 Primary Pumps ATPases(2) AT4G38510 97.342 0.0 972