Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2180 ATGTTATCGGAGTTGATGAACTTTCTGAGGGCCTGCTTTCGCCCTGGTTCGGATCGATATGCACGCTCAGGTTCAGATGCTAGGGGTCGACAGGATGGACTCTTATGGTACAAGGACTCGGGGCAGCATTTGAACGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCCGGCAGTTTGAGCTCCAATGAATCTGGCCCTTATGGCACCTTTGTTGGTATCTATGATGGGCATGGAGGGCCCGAGACATCGCGGTTTATCAATAATCACCTATTTCACCATCTCAAGAGGTTTACTGCAGAGCAACAATCAATGTCAGTGGATGTGATTCGCAAGGCAATTCAAGCGACTGAAGAAGGATTTACATCACTTGTTGCCAATCAGTGGGTAATGAAACCCCAAATTGCAGCAGTTGGGTCATGCTGTCTTGTCTGTGTTATTTGTAATGGAAGCATTTACGTAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGGGAGGTTCTAGCCATGCAATTGTCAACCGAGCACAATGCTGCAATAGAGTCTGTTAGACAGGAGCTGCATTCTTTGCATCCTGATGATTCACAGATTGTTGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTCATTCAAATTTCTAGATCTATTGGGGATGTATATTTGAAAAAGGCCGAGTTCAATAGAGAACCTCTATATGCTAAATTTCGACTTCGTGAGCCATTCAAGAGGCCAATACTGAGTTCAGAACCATCAATATCAGTGTATCAGTTGCAACCACAAGATCAGTTTATTATATTTGCATCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCCCACAGCGGAAGTGCAAGGAGGCTAGTGAAAGCTGCTCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAAATTGACCGTGGGGTTCGGCGACATTTCCATGATGATATCACTGTGATTGTGGTGTTTCTTGACTCAAATCTCGTGAGTAGGGCAAGTTCTGGCAAGTTCACTAATGTATCTGTTAGAGGGGGAGGTATTACCCTGCCTTCTAACACACTGGCACCTTGTACGACACCAACGGAGGGTGGCGGTACCTGA 1194 0.4514 MLSELMNFLRACFRPGSDRYARSGSDARGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGSLSSNESGPYGTFVGIYDGHGGPETSRFINNHLFHHLKRFTAEQQSMSVDVIRKAIQATEEGFTSLVANQWVMKPQIAAVGSCCLVCVICNGSIYVANLGDSRAVLGRVVKATGEVLAMQLSTEHNAAIESVRQELHSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVYQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNNPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSGKFTNVSVRGGGITLPSNTLAPCTTPTEGGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2180 397 CDD PP2Cc 48 355 IPR001932 -
Glsi03g2180 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Glsi03g2180 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Glsi03g2180 397 Gene3D - 36 365 IPR036457 -
Glsi03g2180 397 SMART PP2C_4 39 353 IPR001932 -
Glsi03g2180 397 FunFam Phosphatase 2C family protein 36 365 - -
Glsi03g2180 397 PANTHER PROTEIN PHOSPHATASE 35 353 IPR015655 GO:0004722|GO:0006470
Glsi03g2180 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Glsi03g2180 397 Pfam Protein phosphatase 2C 70 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2180 Glsi-ChrGlsi03 82306028 82308987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2180 1 396 PP2C-type Phosphatase Gene Family AT4G38520 75.505 0.0 639