Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2161 ATGGACGACGGTGAGCTCGATTTCTCCAATCAGGAAGTGTTCTCGAGCCCAAACATGGGCGAACTTCCAAGCAGTTGCTCAATGGATAGTTTCTTTGAAGAACTTCTCAAGGATTCCCATGCTTGCACTCATACCCACACTTGCAATCCTCCTGGCCCTGATTATTCACATACCCACACTTGTTATCATGTGCACACCAAAATTGTCCCTGCCTCTGCTGAAGACAAGGTTGGCACTGATGACACTGCTGAGTCTGTGGAAAAGAAGTCCAAAAAACGTCCTCTAGGTAACCGTGAAGCAGTTCGTAAGTATCGTGAGAAAAAGAAAGCCCGGGCTGCATCTCTGGAGGATGAGGTTGTAAAACTGAGGGCTTTGAATCAACATTTGATGAAGAAGTTGCAAGGTCAGGCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGTTTACTTGTGGACATTCGAGGAAGAATTGAAGGGGAGATTGGATCTTTTCCATATCAGAAATCAGCTAATTCAAACATGGCAAACCCAAGTTTGCCTGGTTCTTATGTAGTGAATCCTTGTAACATGCAGTGTGATGATCGAGTCAATTGCCTTCATCCAGGAGTAGATGGAAAGACTACAGAAGTTGCCTCACTAAATGGGCCAGGATTTAATGGTTGTGAATTTGAGAGTCTCCAGTGCCTAGCAAGCCATAGTTTGGGGCCCAAGGATCTTCCTGGTTGTGGAGTTGGGCAGACAGTGCCGAATGTCAATTCTTGTGCACCAAATAAAAGAAAAGGTGAAGCCCGTTAA 795 0.4516 MDDGELDFSNQEVFSSPNMGELPSSCSMDSFFEELLKDSHACTHTHTCNPPGPDYSHTHTCYHVHTKIVPASAEDKVGTDDTAESVEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSANSNMANPSLPGSYVVNPCNMQCDDRVNCLHPGVDGKTTEVASLNGPGFNGCEFESLQCLASHSLGPKDLPGCGVGQTVPNVNSCAPNKRKGEAR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2161 264 MobiDBLite consensus disorder prediction 77 98 - -
Glsi03g2161 264 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Glsi03g2161 264 Coils Coil 98 132 - -
Glsi03g2161 264 MobiDBLite consensus disorder prediction 1 20 - -
Glsi03g2161 264 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Glsi03g2161 264 MobiDBLite consensus disorder prediction 73 98 - -
Glsi03g2161 264 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Glsi03g2161 264 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Glsi03g2161 264 SMART brlzneu 84 152 IPR004827 GO:0003700|GO:0006355
Glsi03g2161 264 Gene3D - 76 153 - -
Glsi03g2161 264 CDD bZIP 91 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2161 Glsi-ChrGlsi03 82219055 82219849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2161 1 264 bZIP Transcription Factor Family AT2G16770 65.038 1.98e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi03g2161 bZIP_2 6.4e-14 CL0018