Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2159 ATGTCAAACCACCAAGACGACCTCGATCTACTTCTTTCCCTTCAGGACAGGGTTCTGGAAACTCCTCCCGGTTCTCCTTCATCCCGTTCACCAGGTTACCTATCCGAAGATGAGTTGCCGAAGCATAGAGAGAAAGCTGACATGTCCGTCTTCAGAAATGCTGTTCAGGATTGTCTTCACTACGACCCCAAAGCAAATAAGAAAGCTGCTAAGTTGAATGGACCGGTGACCACAAATAATGGCGAAGTCGAGAAGTTTTCAGGTCTGCGAATAAGGAACGAATCGGTAACCTCTGCAGAGCTCAGGGAACGCTTTTCAGACATTCGTTTTGTGCGGCTATCAGTAATCAAGAATTTGCTGATTGGGGATACTTTTTCTGGATGTTGGGCGACTGTTGGAGTCTTGACAGAGAAGGGGAGTCCAAAGACAAGTTCTACGGGGAAGAGCTATTGTATATGGAAAATTGGGTGTTTGGATGAAAGTGCTATTTCCCTTTTCTTGTTCGGTGATGCTTATCAGAGGAACTCGCAAGAACATGCGGGAACGGTCTTTGCACTGTTTAATTGTGCAGTACGCAAGGATACCACGGGCAATGGTTTTTCTTTAAGTGCATATTCCCCAAATCAAATTTTGAAGATGGGAACTTCTGTTGATTACGGAGTTTGCAAGGGAAAACGAAAGGATGGGATGGCTTGTACGCTGGTCATAAATAAACGTCAAGGGATATATTGTAAATTTCATAAATCGAAAGCATCAGAGAAATATTCCACAATGCGAACTGAACTCAAGGGAGGGAACTTAAGAACAGCATTTAGGCCCAGGAATTATCTCAAGTCCGAAGGAATTCACTTAGTTGACCCTCTTGCTGACAAAACAAACTCGAAAAAATCACAGCCAGTGAAATTGTTGTCTGTGGATAGTCTCAGGAAGGCATTGAGCAATGCAGATAAAGTGACAACTAATATGCACTCGCAAGGAATAAGATTTCTTTCTGAGATCACAGGCAAGCTGAATCCTAAGTTGATGAATAGAGGACCAATGAAGCCTCATGAGCAAAGCAAGTGCACAGAGAAGAGGAAATCATCGCTAAACGTGGGATCCCCTGCAATAATAAGAAATCAACATTTAGATGCCAAGAGAATAAAAGCTGAAGGGCAAGCATTGGTTGATAAAACCAGAAAGGGTACCGGAAAGATGATTGAATTAGATCTTGTTAGTTCAGATGACGACATCTGA 1236 0.4288 MSNHQDDLDLLLSLQDRVLETPPGSPSSRSPGYLSEDELPKHREKADMSVFRNAVQDCLHYDPKANKKAAKLNGPVTTNNGEVEKFSGLRIRNESVTSAELRERFSDIRFVRLSVIKNLLIGDTFSGCWATVGVLTEKGSPKTSSTGKSYCIWKIGCLDESAISLFLFGDAYQRNSQEHAGTVFALFNCAVRKDTTGNGFSLSAYSPNQILKMGTSVDYGVCKGKRKDGMACTLVINKRQGIYCKFHKSKASEKYSTMRTELKGGNLRTAFRPRNYLKSEGIHLVDPLADKTNSKKSQPVKLLSVDSLRKALSNADKVTTNMHSQGIRFLSEITGKLNPKLMNRGPMKPHEQSKCTEKRKSSLNVGSPAIIRNQHLDAKRIKAEGQALVDKTRKGTGKMIELDLVSSDDDI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2159 411 PANTHER PROTEIN MCM10 HOMOLOG 25 337 IPR040184 GO:0003690|GO:0003697|GO:0006270
Glsi03g2159 411 MobiDBLite consensus disorder prediction 343 363 - -
Glsi03g2159 411 Gene3D - 75 248 IPR012340 -
Glsi03g2159 411 MobiDBLite consensus disorder prediction 18 39 - -
Glsi03g2159 411 Pfam Primase zinc finger 214 259 IPR015408 GO:0005634|GO:0006260
Glsi03g2159 411 FunFam DNA replication licensing factor mcm10 75 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2159 Glsi-ChrGlsi03 82209649 82212673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2159 1 410 Core DNA Replication Machinery Family AT2G20980 56.204 9.06e-152 433