Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2154 ATGAGAGCGCTACCCATGCGGGCTATCCTTTCATCGCCCACTACTGGTCTTTCTTCGCTCGTAGCCTTGTTCGTCTCTGCCAATCAAAATCCACGCTCTGTTCTTCTTCCAACAGTTTCTGCTCATTTCCATTTTCTGAAAACAAAGGAACAAGTGAGTTGCGAGTTTTCAATGGCGTTGCCGGTGGTGGACACTGAGTATCTCAAAGAGATCGACAAGGCTCGTCGTGATCTCCGTGCGCTCATCGCCGGCAGGAACTGCGCTCCTATCATGCTTCGCTTGGCTTGGCACGATGCAGGAACTTATGATGCCAAGACGAAGACGGGTGGACCTAATGGCTCCATAAGGAACGAGGAAGAGTATTCACATGGCTCCAACAATGGCTTGAAGAAGGCTATCGATTTCTGTGAGGAAGTGAAGGCAAAACATCCCAAGATAACATATGCAGACCTTTACCAGCTTGCAGGTGTTGTTGCAGTTGAGGTTACTGGAGGTCCCACAATTGACTTTGTTCCTGGGAGAAGGGATTCAAATATATGTCCCAGAGAAGGACGGCTTCCAGATGCTAAACAAGGTGTGCCCCATCTCCGTGATATCTTTTACCGAATGGGCCTGTCTGACAAGGATATTGTTGCACTATCTGGGGGGCATACTCTGGGAAGAGCACACCCAGAGAGATCGGGGTTTGATGGTCCTTGGACAGAGGAACCTCTGAAGTTTGATAACTCATACTTTGTGGAACTGTTAAAAGGAGATTCTGAGGGGCTGCTTAAACTTCCAACAGACAAGGCTTTATTGGAGGATCCCGAGTATCGTCGATATGTTGAGCTATATGCAAAGGACGAAGATGCATTTTTTAGAGATTATGCTGAATCGCATAAGAAACTTTCAGAGCTAGGGTTTGTACCAAGTTCAAAGGCAACTATCAGGGATGGCGTCATACTGGCACAAGGTGCTGTTGGAGTTGCAGTTACTGCTGCTGTGGTGATTCTCGGTTACTTGTATGAAGTTCGCAGAAGAGCAAAGTAG 1029 0.4742 MRALPMRAILSSPTTGLSSLVALFVSANQNPRSVLLPTVSAHFHFLKTKEQVSCEFSMALPVVDTEYLKEIDKARRDLRALIAGRNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGSNNGLKKAIDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRRDSNICPREGRLPDAKQGVPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTEEPLKFDNSYFVELLKGDSEGLLKLPTDKALLEDPEYRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKATIRDGVILAQGAVGVAVTAAVVILGYLYEVRRRAK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2154 342 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 61 306 IPR044831 GO:0004601|GO:0034599
Glsi03g2154 342 Gene3D - 74 300 - -
Glsi03g2154 342 Gene3D Peroxidase, domain 2 187 293 - -
Glsi03g2154 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Glsi03g2154 342 CDD ascorbate_peroxidase 61 301 - -
Glsi03g2154 342 ProSiteProfiles Plant heme peroxidase family profile. 88 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 145 163 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 88 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 277 301 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 185 202 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 203 224 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 164 176 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 225 249 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 67 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 120 144 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 PRINTS Plant ascorbate peroxidase signature 106 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 FunFam Cytosolic ascorbate peroxidase 74 191 - -
Glsi03g2154 342 SUPERFAMILY Heme-dependent peroxidases 72 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi03g2154 342 FunFam L-ascorbate peroxidase, cytosolic 187 293 - -
Glsi03g2154 342 Pfam Peroxidase 75 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2154 Glsi-ChrGlsi03 82157959 82163062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2154 146 310 Peroxidase AT4G16270 33.495 1.04e-20 89.7