Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2136 ATGAAAGAGGCCTACTGTGCGCTAGCTGTTGAGTGTACTCTCAAATATTTGGCAGCTTCCACTGACAATAATTCCGAGTATGTCAACGCAGTAGCTAGTATTTGGCGGGGTCGAATTGGGTCTATGGAGGCTTCTAACTACAATATGTTGTTTTCCAAGGAGTTAAAAGAGTGGAAGACTGATTTTGAAGTTTCAGTTTTTGACTACCAAATGTCCAAGAGATTGTCCAAAATGAATAGTAGTAGGAGAAACGGTTATGGATATTTTAGTACCAGAAACACCTTACAGAAAGTTAGTGACTATTTGGCAGAGGCAAGGGGAAAAATGGGAATTTCGTTTCTTGAATCTGCTGCCAAGACTAACTGTGCTGATTGTGGATTTGTTTCGGAAGCTGAATCAATGACTAAGAGAAACAATGGACATGATGGAGATCCTGATGCTATTCATGCTGTTCGAACTTTCATCAAAAAGCAACTTGCAAGTGAACTGAGAGCAGATTTCCTCAGCACAGTGAAAAATAATAGGAGCTCGGCAGAATATGTATTCTACCATCCTGACATGGCCAAGCGTGCTCTGAAGAGTATAGGAATAAAAATATCTAGTGTTGAATTGTTGTTTGATGAGACTCACAAAAGGATACTTTTGATATCAGCTGTCAGCATTGCAGATCAATTCACCACCAGAAGTGTTTTGAGCTACTCTATGCGTCTATGA 714 0.3992 MKEAYCALAVECTLKYLAASTDNNSEYVNAVASIWRGRIGSMEASNYNMLFSKELKEWKTDFEVSVFDYQMSKRLSKMNSSRRNGYGYFSTRNTLQKVSDYLAEARGKMGISFLESAAKTNCADCGFVSEAESMTKRNNGHDGDPDAIHAVRTFIKKQLASELRADFLSTVKNNRSSAEYVFYHPDMAKRALKSIGIKISSVELLFDETHKRILLISAVSIADQFTTRSVLSYSMRL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2136 237 Pfam Domain of unknown function (DUF3458_C) ARM repeats 140 201 IPR024601 -
Glsi03g2136 237 Gene3D - 125 231 IPR037144 -
Glsi03g2136 237 PANTHER MYB TRANSCRIPTION FACTOR 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2136 Glsi-ChrGlsi03 82062397 82064377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2136 1 119 Single Myb Histone (SMH) Gene Family AT1G15720 29.412 8.45e-10 56.2