Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2119 ATGGATTTACCTAACTCCAAAGCAGTTGTAGATGAAGAATTTCCGAGGTCTTTTCGAAGTTATGAGGCAAGCTGTCCGGTGGGCAAGAACTCTTTATGGCCAAAACTTCTTGCTTCCATTGGCTCCCATGATGTTTTCAGACCAGAGGTGTGGAAGGCAGCTTTGACAGAGTTAGTAGCAACTGCCTCTCTAATGTTCACCCTGACGACTTCCATTATTGCATGCTTGGACTCACATGAGGTGGATCCTAAGCTTCTTGTTCCCTTTGCAGTATTCGTAATAGCCTTCCTCTTCCTAATGGTGACAGTTCCTCTGTCTGGGGGTCATATGAGCCCAGTTTTCACATTCATCGCTGCTCTAAAGGGTGTTATAACTCTTACTCGCGCTCTTATTTACGTATTAGCGCAGTGCATTGGCTCAATTTTTGGGTTTCTAATCATTAAGGGTGTGATGCAGAAAAAGTTAGCAGAAACTTATTACTTGGGTGGCTGTGCCATTAGCGGCGATGCAGAAAGCACTGGGATTAAGAAGCAAGTCGCGCTGCTATTGGAATTTTCTTGCACGTTTGTGGTGCTCTTTGTGGGTGTCACGGTGGCATTTGACAAAAGAAGGTCCAAAGATTTGGGCTTGCCCTTGGTGTGTATGGTAATAGCAGGAGCCATGGCATTAGCAGTATTTGTGTCTGTAACTGTAACTGGGGAAGCTGGATATGCAGGTGTGGGCTTGAACCCAGCAAGGTGCTTGGGCCCTGCATTACTTCAAGGAGGTCAATTGTGGAAAGGACATTGGGTTTTCTGGGTTGGGCCCTTCTTGTCCTGCATTTTCTACTATGTTGTCTCTGTGAACTTACCCAAGGAGGGTTTGATCTGA 870 0.4598 MDLPNSKAVVDEEFPRSFRSYEASCPVGKNSLWPKLLASIGSHDVFRPEVWKAALTELVATASLMFTLTTSIIACLDSHEVDPKLLVPFAVFVIAFLFLMVTVPLSGGHMSPVFTFIAALKGVITLTRALIYVLAQCIGSIFGFLIIKGVMQKKLAETYYLGGCAISGDAESTGIKKQVALLLEFSCTFVVLFVGVTVAFDKRRSKDLGLPLVCMVIAGAMALAVFVSVTVTGEAGYAGVGLNPARCLGPALLQGGQLWKGHWVFWVGPFLSCIFYYVVSVNLPKEGLI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2119 289 PANTHER AQUAPORIN-LIKE 29 287 - -
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2119 289 SUPERFAMILY Aquaporin-like 45 274 IPR023271 -
Glsi03g2119 289 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Glsi03g2119 289 Pfam Major intrinsic protein 48 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2119 Glsi-ChrGlsi03 82004642 82005877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2119 51 284 Major Intrinsic Protein MIP AT3G61430 30.364 2.88e-26 102