Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2118 ATGGATTCACCTAACTCCCAAGTTGTATTAGATGGACAATGTCCGAGGTCCGTTCGAAATTGTGAGCCTATTTGTACGGTGAGGAAAAAGTCTTTGGGGCCAAAGCTTCTTGCTTCCATTGGTGCCCACGAATTTTTCAGATTAGAGATGTGGAAGGCAGCCTTAACAGAGTTAATAGCAACTGCGTCCCTATTGTTCACCTTGACGACTTCCATTATTGCATGCTTGGATTCGCATGAGGCTGATCCTAAACTTCTTGTTCCCTTTGCAGTATTCATAATAGCCTTTCTCTTCCTAATGGTGACAGTCCCTCTATCTGGGGGCCACATGAGCCCAGTTTTCACATTCATCGCTGCTCTAAAGGGAGTTGTCACTCTTGCTCGTGCTCTCATTTACGTGTTGGCCCAATGCTTTGGCTCAATTATTGGGTTTGTAATAATAAAGAGTGTGATGGATCATAAACTAACAGATGCATATTCCTTAGGAGGCTGTGCCATTAGTGCTAAGGGGGAAAACTCAGGCATTAAGCAGCAAGATGCTTTGTTATTAGAATTTTCTTGCACATTTGTGGTGCTCTTTGTGGGTGTGACAGTGGCATTTGACAAGAGAAGGTCCAAAGATCTGGGCTTGCCAATGGTGTGTATGGTGGTAGCAGCAGCCATGGCACTAGCAGTGTTTGTGTCTATAACTATAACTGGGCAGGCTGGATATGCAGGTGTGGGCTTGAACCCAGCAAGGTGCTTAGGCCCAGCATTACTTCAAGGAGGTCAATTGTGGAAAGGACATTGGGTTTTCTGGGTTGGGCCCTTCTTGGCTTGTATTTTCTACTATGTTGTCTCTGTGAACTTACCAAAGGAGGGTTTGGTTTGGGTAGATGGAGAATATGACATCCTTAAGTTGGGTGGGGCTTGTTTTGGCGAAAGCATGAAACATTATAATATAAAGTATATTTTGCTTTTGATGTTACAAGAAGTCTACAGTACAACTAGAAGTGACCAACAAGACCAAATAGAGGTAAAATGA 1023 0.436 MDSPNSQVVLDGQCPRSVRNCEPICTVRKKSLGPKLLASIGAHEFFRLEMWKAALTELIATASLLFTLTTSIIACLDSHEADPKLLVPFAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALKGVVTLARALIYVLAQCFGSIIGFVIIKSVMDHKLTDAYSLGGCAISAKGENSGIKQQDALLLEFSCTFVVLFVGVTVAFDKRRSKDLGLPMVCMVVAAAMALAVFVSITITGQAGYAGVGLNPARCLGPALLQGGQLWKGHWVFWVGPFLACIFYYVVSVNLPKEGLVWVDGEYDILKLGGACFGESMKHYNIKYILLLMLQEVYSTTRSDQQDQIEVK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2118 340 Pfam Major intrinsic protein 47 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi03g2118 340 PANTHER AQUAPORIN-LIKE 27 301 - -
Glsi03g2118 340 SUPERFAMILY Aquaporin-like 50 277 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2118 Glsi-ChrGlsi03 82001605 82003139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2118 44 284 Major Intrinsic Protein MIP AT3G61430 29.921 1.02e-24 99.8