Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2107 ATGCCGCCGGAGCCCGGAAAGTGCAGCAAAATCCGACACATTGTCCGAATCCGGCAAATGCTTCTGCAGTGGCGCAAGAAAGCGCGTATAGCGGCGGTTCGCGCGCCGTTCGATGTACCCGCGGGCCACGTATCCGTCTACGTGGGCCCTAGTAGCAGGAGGTTTATCGTGCGCGCGACGTACCTGAACCACCCCATCTTCAAGAATCTTCTGGTGCAAGCGGAAGAAGAGTACGGTTTCTGCAACCAAGGTCCCCTGACGCTCCCGTGCGAGGAATCGCTGTTCGAAGAGGTGCTGCGGGCGATGTCTGGATACGGTCCGGGTCAATCGCCCAGGTATTCGAGCCTCGAAGACTTCCAGAAGCGTTGCCACATGGATGTCCGAAGCAATTATGACTTTGTCGGGGAATCGAGGCCGTTGCTTTACGACGAGCCCATCTGCTAA 444 0.5766 MPPEPGKCSKIRHIVRIRQMLLQWRKKARIAAVRAPFDVPAGHVSVYVGPSSRRFIVRATYLNHPIFKNLLVQAEEEYGFCNQGPLTLPCEESLFEEVLRAMSGYGPGQSPRYSSLEDFQKRCHMDVRSNYDFVGESRPLLYDEPIC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2107 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 99 IPR003676 GO:0009733
Glsi03g2107 147 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2107 Glsi-ChrGlsi03 81953767 81954210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2107 6 141 Calmodulin-binding Proteins AT4G34750 50.000 8.87e-41 132