Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2106 ATGCAATTTTTTAAAACAGGTATTGAAGACATGGCTGCTGATATTCTGCATTGTGTTTCCATTGCATATGGATTATATGAGATCGAGAATGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGATCCTTGTCGACCTGGTTCGAAGGGTCACTGTTGATAATGTTGCAACTGCTAAAGAAATTGCTGTGGAATGTGGAATATTTGGTTCACTGGCAGATGCTACTGAGCCAAACATTATTGAAGGAAAAGCATTTCATGCCTTGACAGATACTCAGAGAAAAGACATTGCTGAAAGGATATCAGTATCATTCAACTACTATGACAGCCTTTTTTTTGTTTGTGCTCTTATTCAAGGTCTGAATTCGGTGATTAGTGGCATTTTTCTCATGAATATATGTCGACATTCGGACTGGAATGCATTAACATTGCTTGACTTGTACCTACCTAAAAATAATAATGGTCGAAAGCTCGTTGTTGCCTTTGTTATTGGCAGGGCCTGGATTATTGGACATTTACAAAGCATGGGGAAGTCTTTTAGTTCAACAGTTAGCAGAGAGAGACATTATGGTAGCCTGCCTAGATATTACCGAAATTATCCTCAGGGAACCATCAGTGATGTGATACATGATGCTTCTCAAGTTTTGCATAGGATTTACCTAATGGGGAAGCCAGCTGGTGCACATATTGCTGCTTGTGCACTCGTGGAGCGGGCAATCGAAGAGGCTGGTGAAGGAGAGAGTATTTCTTGGAGTGTCTACCCGATCAAGGCTGATTTTGGTTTATCTGGAGGTTATGCTAACATGATTGCTGTGCAGTCTTGTTTAATTGAGAACTTACTTTTATATCTTCATAATGGAAGGAGAGGAATCCTTGAGACGGTTTTCCCCAGAGGTAATGGTTCAACATCCAAACATTGCAAGTTCTTTTTCATGGTACTGGGAATTATTCCATACCATCAGATGCCAGGAGCTTACCTCTCCTCCCTCAACACCGTCAGCAAAGTCCAAATCACAGCTGATTTGCAGGTTGTATTGCCCTCTGTAAGACTTCGATATGAAGGAGAAAAATCTTTTATCTTGCATAACCGTGAGACTGAAATACTGAATACTGGAAGCTGGCAACTTGACTTCGGTGTCTATTCTTTGTTACTAGAAGGTAGCCTTACGGGGGCATTTCATGTGGTTAAGGTCTGTGTATCTGTTTTTGGAGATGAAAGAGTAAAGGAAGTTGCAATTCCTGGATTGAAGTCAAAGGCTAAATATGTTCAAGGTGAGCTGGGGAGGTGTATGAAATTGCGGCCAACTCTTGAGATACGGTTTATAGAGGATGAATCCTTAGAGGGAGGAAGCAGGTATCCACTACAGATTGCAATTTTGGATAGAATAAAGGATGAGAAAAAGGACGTAGAGACCCAAAACGAAGAGCAATCGGATGCTTTAGCAGTACATGAAGATGACAAAGATTAG 1467 0.409 MQFFKTGIEDMAADILHCVSIAYGLYEIENVPTSEEELAHWILVDLVRRVTVDNVATAKEIAVECGIFGSLADATEPNIIEGKAFHALTDTQRKDIAERISVSFNYYDSLFFVCALIQGLNSVISGIFLMNICRHSDWNALTLLDLYLPKNNNGRKLVVAFVIGRAWIIGHLQSMGKSFSSTVSRERHYGSLPRYYRNYPQGTISDVIHDASQVLHRIYLMGKPAGAHIAACALVERAIEEAGEGESISWSVYPIKADFGLSGGYANMIAVQSCLIENLLLYLHNGRRGILETVFPRGNGSTSKHCKFFFMVLGIIPYHQMPGAYLSSLNTVSKVQITADLQVVLPSVRLRYEGEKSFILHNRETEILNTGSWQLDFGVYSLLLEGSLTGAFHVVKVCVSVFGDERVKEVAIPGLKSKAKYVQGELGRCMKLRPTLEIRFIEDESLEGGSRYPLQIAILDRIKDEKKDVETQNEEQSDALAVHEDDKD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2106 488 SUPERFAMILY Ribosome-binding factor A, RbfA 387 451 IPR023799 -
Glsi03g2106 488 Coils Coil 459 486 - -
Glsi03g2106 488 Gene3D alpha/beta hydrolase 131 270 IPR029058 -
Glsi03g2106 488 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 315 487 IPR000238 GO:0006364
Glsi03g2106 488 MobiDBLite consensus disorder prediction 466 488 - -
Glsi03g2106 488 Gene3D - 383 449 IPR015946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2106 Glsi-ChrGlsi03 81942619 81950620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2106 144 295 Carbohydrate Esterase AT1G26120 46.988 1.61e-32 127