Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2104 ATGGCTGCAGCCAATCTCTCTACTCTCTCTGTCTCATCCTCCCTTTCGAAAGCTTCTTCTCTCCCTCTCCTCACATCTAACACCGTTACTTGTTTTTGCAACAAAACCCTCCCAAAACCCACCACCTTTCCCATACCCATTATTTCTCACGCCGCCTCGGAGACCCACAAAAGCTCTTTCGCAGTTTCGTCTAAAAATCCAATTTCGGATCTTGTATCCGCAACTAAGCCATGCCTAGAAGCATACTGTGATGATGACGAAAAGCCCCGCGAGGAGTGTGGTGTGGTCGGTATTTACGGTGACCCCGAGGCGTCTCGTCTCTGCTATTTGGCCCTGCACGCGCTCCAGCACCGTGGCCAGGAAGGTGCTGGGATTGTAGCCGTTCACAACAATGTCCTTCAATCGATCACTGGGGTTGGGCTTGTTTCTGATGTGTTTAACGAGTCTAAGCTCGATCAGTTACCTGGAAATTTGGCTATTGGGCATGTTCGATACTCTACCGCAGGCCAATCGATGCTTAAGAATGTCCAGCCCTTCGTTGCAGGGTACCGCTTCGGCTCTGTTGGGGTTGCTCATAACGGAAATTTGGTGAATTATCTCTCCTTAAGGGCCGGGCTTGAAGAAAAAGGATCGATTTTCAACACTAGTTCTGACACTGAAGTTGTGCTCCATCTTATTGCGACCTCAAAGCACAGACCTTTCATATTGAGGATTGTTGATGCCTGCGAGAAGATTGAAGGGGCCTATTCTATTGTCTTTGTCACGGAGGATAAGCTGGTTGCAGTGAGGGATCCCTTTGGATTTCGACCATTGGTTATGGGAAGGAGAAGCAATGGTGCCATCGTCTTTGCCTCTGAAACTTGTGCTCTTGATCTGATTGAAGCCACATATGAGAGAGATGTGTACCCAGGTGAAGTTTTAGTGGTGGATAAAAATGGGCTCCAATCCCTTTGCTTAATGTCTCATCCACAGCCAAAGCAATGCATCTTTGAGCATATATACTTTGCTCTCCCCAACTCAGTGGTTTTTGGAAGATCCGTGTATGAATCTCGGAGGAAATTTGGGGAAATACTGGCTACTGAAAGCCCTGTTGATTGTGACGTTGTGATAGCAGTTCCAGATTCTGGTGTGGTGGCCGCTCTTGGTTATGCTGCAAAAGCTGGGGTTCCTTTTCAGCAGGGATTAATCAGGTCTCACTACGTTGGAAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTCGGTGTGAAACTGAAGCTCGCACCAGTTCGTGCAGTGCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGACTCAATTGTAAGAGGAACCACATCTTCGAAGATCGTGAGGTTGATAAAGGAGGCAGGTGCCAAGGAGGTTCACATGAGGATTGCTAGCCCACCAATTATAGGGTCATGTTATTATGGGGTGGACACACCAAGTTCAGAGGAGTTGATCTCTAATAGGATGAGTGTGGAGGAAATTAGAAATTTTATTGGATCAGAGTCACTTGCTTTTCTGCCATTTGATAGCTTGAAGAGGTTGTTGGGCAATGATTCTCCTAATTACTGTTATGCTTGCTTCTCTGGGAACTACCCTGTGGAACCTAGAGAGCTTAAAGTGAAGAGGGTTGGTGACTTTGTGGATGATGGCTTAAATGGGAGTTTGGAATCTATAGATGGGGGTTGGGTTCAAGCAAGCCCAAATCCAAAAGGGGTGAAGGCCGTTGGTCTCTGA 1740 0.4707 MAAANLSTLSVSSSLSKASSLPLLTSNTVTCFCNKTLPKPTTFPIPIISHAASETHKSSFAVSSKNPISDLVSATKPCLEAYCDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVHNNVLQSITGVGLVSDVFNESKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYLSLRAGLEEKGSIFNTSSDTEVVLHLIATSKHRPFILRIVDACEKIEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYERDVYPGEVLVVDKNGLQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLAPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRNFIGSESLAFLPFDSLKRLLGNDSPNYCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQASPNPKGVKAVGL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2104 579 NCBIfam amidophosphoribosyltransferase 93 534 IPR005854 GO:0004044|GO:0009113
Glsi03g2104 579 Hamap Amidophosphoribosyltransferase [purF]. 92 533 IPR005854 GO:0004044|GO:0009113
Glsi03g2104 579 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 93 534 IPR029055 -
Glsi03g2104 579 CDD GPATase_N 93 343 IPR035584 -
Glsi03g2104 579 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 93 312 IPR017932 -
Glsi03g2104 579 SUPERFAMILY PRTase-like 328 539 IPR029057 -
Glsi03g2104 579 Pfam Glutamine amidotransferase domain 171 290 IPR017932 -
Glsi03g2104 579 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 93 316 IPR029055 -
Glsi03g2104 579 Gene3D - 352 516 IPR029057 -
Glsi03g2104 579 CDD PRTases_typeI 355 466 IPR000836 -
Glsi03g2104 579 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 91 540 - -
Glsi03g2104 579 Pfam Phosphoribosyl transferase domain 352 462 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2104 Glsi-ChrGlsi03 81924734 81926473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2104 84 566 PRT Gene Family AT2G16570 84.948 0.0 852