Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2102 ATGCAAATCACCACCCTTCACCCGGCCGTGAATGATGGGAGCGGGAATCCCGATACTTCGCAAGATTACGGGGATTTGATTCACTGTATTTTGTATTCTTTTTGGTTGGTGCTGAAGTGGGTTGAGCTAGAATTCAGGTTTATCACCTTGTGTGAAGGTAAGAGATTGTGTTATTGCGGGTTATCATACATACCATATCGTAGTTGCCGAAGGAAAATGGGTGACACTGAAGAAGCCAATACTGACATGATGCAAAGGCTTCAATCCTCATTCGGAACTTCTTCGTCTTCGATTTTGAAACAAAATTTAAGTATGGACCAACTTACCGTGCCCCAATTCAATCCCTCACAAATGCGCGCGCGGCATTTTCAGCAGAACTTTGGCGGGGATGGTAATAAAAGAGTAGGCATACCACCATCGCATCCCCACCAGATCCCACCCATCTCGCCATATTCCCAGATCCCAGTGTCGCGGCCCACGTCTCTGCAAATGAGTTCACAGAATATTAGCCCGGGACCTACTCATTCGCGATCATTATCACAGCCATCGTTTTTCTCGCTCGACTCTCTGCCTCCATTGAGCCCGTCTCCATTCCGTGACTCCTCGTCAACGTCCGTGTCAGACCCAGCTTCAGCTGATGTTTCAATGGAGGATCGGGATGTAAGTTCGCATTCTTTGTTGCCACCTTCACCTTTTACAAGGGCTAATCTTTCAAGGGTTGGAGATAGTTTACCCCCTCGTAAAGCACATAGGCGCTCTAACAGTGATATTCCATTTGGGTTTTCTACTGTAATGCAATCTTCACCTCCCCTTATCCCGCTAAGGAGTGCTGGTGGATTAGAGCGGTCAGTATCTGGCAGAGAATTTTCAGGTGCAGCTAAGCCTGCACAGTTAGTCAAAAGGGAAACAAGCTGGGACAGAAGTGTGGACCACAATGCAGAGGGATCAGGCGAGAAGAAATCCTCTGAAGGAGAAGCTGTGGATGATCTTTTCTCTGCATACATGAATTTAGATAACATTGATGCACTAAACTCTTCGGGGACCGATGAGAAAAATGGTAATGAAAATCGAGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGCGATAGTAGTGACAATGAAGCAGAAAGCAGTGTTAACGAAAGTGGGGGCAACATGCAAAGACAGGGAATGCATTCTTCAAGTGAAAAGAAGGAAGGGATGAAAAGGAGCGCGGCAGGGGATATTGCACCTACCACCAGGCACTACAGGAGTGTCTCAATGGATAGTTTCATTGGGAACTTGAACTTTAATGATGACTCCCTTAAACTGCCACCTTCACCCGGAACTCGTCCTGGACAGATTTCGCCCAGTAATTCAATTGATGGTAATTCAGCTGCCTTTAGCTTGGAGATTGGAAATGGTGAATTTAGTGGGCCTGAGTTGAAGAAAATTATGGCGAATGAAAAACTAGCTGAGATTGCTATAACAGATCCAAAGCGGGCAAAAAGAATTTTAGCAAACCGGCAATCAGCTGCTCGTTCCAAAGAACGGAAGATGCGATACATTTCAGAACTAGAACACAAGGTTCAGACTCTACAGACGGAAGCCACCACACTGTCCGCGCAGCTTACCCTGCTACAGAGAGATTCTGTGGGTCTCACTAACCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCCATGGAACAACAGGCAAAACTCCGAGATGCCCTAAATGAAGCTCTAACTGCTGAGGTTCAACGACTAAAGATTGCTACGGCTGAATTGAATGGGGATTCTCACCCTTCTGGCTGCTTGATCCCACAGCATTCTATTAACCCCCAAATGTTCCAGCTGCGGCAGCAATCACCGGCATCCCAACCAAACATTCATATGCAACAACAGCAGCAGAATGGTAGTGCCACTTCAAAGACCGACTTGAAACAATAG 1941 0.4621 MQITTLHPAVNDGSGNPDTSQDYGDLIHCILYSFWLVLKWVELEFRFITLCEGKRLCYCGLSYIPYRSCRRKMGDTEEANTDMMQRLQSSFGTSSSSILKQNLSMDQLTVPQFNPSQMRARHFQQNFGGDGNKRVGIPPSHPHQIPPISPYSQIPVSRPTSLQMSSQNISPGPTHSRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSDPASADVSMEDRDVSSHSLLPPSPFTRANLSRVGDSLPPRKAHRRSNSDIPFGFSTVMQSSPPLIPLRSAGGLERSVSGREFSGAAKPAQLVKRETSWDRSVDHNAEGSGEKKSSEGEAVDDLFSAYMNLDNIDALNSSGTDEKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNESGGNMQRQGMHSSSEKKEGMKRSAAGDIAPTTRHYRSVSMDSFIGNLNFNDDSLKLPPSPGTRPGQISPSNSIDGNSAAFSLEIGNGEFSGPELKKIMANEKLAEIAITDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKIATAELNGDSHPSGCLIPQHSINPQMFQLRQQSPASQPNIHMQQQQQNGSATSKTDLKQ 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2102 646 SMART brlzneu 493 557 IPR004827 GO:0003700|GO:0006355
Glsi03g2102 646 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 495 558 IPR004827 GO:0003700|GO:0006355
Glsi03g2102 646 Coils Coil 576 596 - -
Glsi03g2102 646 SUPERFAMILY Leucine zipper domain 497 548 IPR046347 GO:0003700|GO:0006355
Glsi03g2102 646 Gene3D - 496 548 - -
Glsi03g2102 646 FunFam probable transcription factor PosF21 496 549 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 367 395 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 618 646 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 342 418 - -
Glsi03g2102 646 CDD bZIP_plant_RF2 498 547 IPR044759 GO:0003700|GO:0006355
Glsi03g2102 646 MobiDBLite consensus disorder prediction 124 325 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 154 211 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 256 270 - -
Glsi03g2102 646 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 192 641 - -
Glsi03g2102 646 Coils Coil 513 568 - -
Glsi03g2102 646 MobiDBLite consensus disorder prediction 300 325 - -
Glsi03g2102 646 Pfam bZIP transcription factor 497 551 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2102 Glsi-ChrGlsi03 81913377 81922092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2102 73 615 bZIP Transcription Factor Family AT4G38900 62.100 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi03g2102 bZIP_1 6.8e-09 CL0018