Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi03g2065 | ATGCAAGAACAACAGTACAATAATGTGATCATTCTTGTAGTTGGTTTTGTTGTCTTCACTTTCGCTACTGTTGGAGCATTACTTGTCATGGGAACTCTCAGTGCCTTCCTGCACGCTTCACGACTTCACTGGTTGGAGTTCCAAAACAAATTTTATGAGGGTGATGGTTACGAGTTCTACCCTTTCTCGTTTTCGTTGCTAGATGATGAGGATGAGTTATGCTTTTAA | 228 | 0.4079 | MQEQQYNNVIILVVGFVVFTFATVGALLVMGTLSAFLHASRLHWLEFQNKFYEGDGYEFYPFSFSLLDDEDELCF | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi03g2065 | 75 | Pfam | V-type ATPase 116kDa subunit family | 3 | 64 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
| Glsi03g2065 | 75 | PANTHER | VACUOLAR PROTON ATPASES | 6 | 70 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi03g2065 | Glsi-ChrGlsi03 | 81598037 | 81598565 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi03g2065 | 6 | 72 | Primary Pumps ATPases(2) | AT2G21410 | 71.642 | 5.24e-29 | 105 |