Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2056 ATGTCACCTTCGAAGGCTACCCTCCTGGTCATTCTCTTGGCCTTCTCTTCCGTCCCAACCCCTGCTTTCTCAGCAGCACCAGTTTTCACCTTCACTCCCAAAGATAACTTCCTCATAGACTGTGGTGCAGAGAACGTACCCAACCTTCCTGATGGAAGACAATTCAAATCTGACCCCCAAGCCAGTTCATTCTTACAAGCTAATGATGACTACAAAGTCTCGGCTAATAATGCGGATGTTCCCTCTCCCATTTACACAAATGCGAGGATTTTCATTAACGAAGCTAAGTACTCCTTCAACTTGGCTCAGCCTGGTTTTCATTGGGTTCGCCTTCATTTCTACCCCATAAAAAACAATGTGTTTGATCTTCAGAAAGCTACTTTCTCTGTCAACACCGATAAATATGTTTTGCTTCATAGCTTCAATGTTAACAGCAACGACAAGCCCATCCTCAAGGAGTTCCTAATCAATGCAACTGAAGCACAATTCACCATATCTTTCATTCCCCTGAAAAATTCAGCTGCTTTTATCAATGCACTCGAAGTTGTTTCAGCTCCGGATAACTTGATTTTCGACAATGGCGCAGCCCTTTTCCCGGTCGGAGAATTTTCTGGCTTAACAAATTATGCTTTCCAACCGCTGTACCGGCTCAGCAACGGAGGACCTATGCTCAACACAGTAAACGACACGCTGGGAAGGGCTTGGGTTTCCGACGAGCCTTTCCTTACATCCAAGAACTTGGCAAAGAGTGCCTCAGTGTCTCCCAGCGCCATCAAGTACCCTGATAATAATCCATCAATTTCTCCTCTGATAGCACCACCAACGGTGTATGCTACGGCCACTGAAATGGGCGATGCCAAGCTAAAGCAGCCAAAGTTCAACGTCTCGTGGAAATTTGATGTGGACAATTCTTTTAGTTACCTCATCAGAATGCATTTTTGTGACATTGTAAGCGCCGGGCCTAATGAACTCCGCTTTAACGTCTATATCAATCAGAAAATGGCAATTTCTGAATTGGATTTATCGGCTATTAATGGTGCATTGGGAGTCCCATACTACAAAGACATGGTAGTGAATGCTTCATTGATGTCTCAGGGACTAATAGTTGAGGTTGGCCCAGCAAAGGAAGATGGGGGGAACGTCAACGCTATTATGAACGGTATGGAAATCATGAAAATAAGCAACGCTGTGAATAGTTTGGATGGAGAATTTGGGGTTGATGGAAAAAAAGAAGCTGGTTCTAACCGTGGGACCGTGGCAGCAGTTGGGTTTGCTATGATGTTTGGAGCCTTTGTGGGTCTTGGCGCTATGGTGATCAAGTGGCACAAGAGGCCCCAAGACTGGGAAAGGAGCAAAAGCTTCTCCTCATGGTTACTGCCTCTACATGCCGGTGACGCAAGCTTCATGAGCGGCAGTAAGACCTCAATGGGGTCTCACAAGAGCAACTTCAACTCCTCAGCAGGTTTAGGCCGATACTTTTCCTTCGCAGAGTTGCAGGAAGCGACTAAGAACTTTGATTCCAATGCCATCATTGGTGTTGGTGGATTCGGTAATGTATATTTGGGTGTGATTGATGATGGGACTCAAGTTGCTGTCAAGAGAGGAAACCCACAATCAGAGCAGGGTATCACAGAATTCCAGACTGAGATTCAAATGTTGTCCAAGTTAAGACACAGGCATTTGGTGTCCTTGATAGGATATTGTGATGAAAACGATGAGATGATATTGGTTTATGAGTACATGGCTAATGGACCTTTCAGGGATCATTTGTATGGAAAAAACTTGCCTACTTTATCTTGGAAGCAAAGGATAGAGATCTGTATAGGGGCAGCTCGGGGCCTTCACTACCTGCACACTGGTGCAGCACAAGGTATCATACATCGTGATGTTAAGACCACCAACATTTTGCTTGATGAGAACTTCACAGCCAAGGTTGCTGATTTTGGCCTTTCAAAGGATACACCTATGGGGCAGGGTCATGTCAGTACTGCAGTGAAGGGTAGCTTTGGGTATCTAGACCCTGAGTACTTCAGAAGGCAGCAGTTGACAGATAAGTCAGATGTGTATTCATTTGGGGTGGTCCTACTTGAGGCGCTCTGTGGAAGGGCTCCCCTAAGCCCTCAGTTGCCTAGAGAACAAGTGAACTTGGCTGACTGGGCTATGCAGTGGAAGAGGAAGGGCTTGCTTGAAAAGATCATTGACCCTCTTCTCGTTGGTTCCATTAACCCTGAATCCATGAAGAAGTTTGCCGAGGCTGCTGAGAAGTGCTTGGCTGATTATGGGGTTGATAGGCCTACAATGGGAGATGTGCTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGATGCTTTCACACAAGGAAAGGCTGGGGATGAGAGCAAGCCCTCTGCAGCTGCTGTGCCTCCCTCCCCTACTCCCACTGCTTCAATCTCAGATGATCGCCCAGTTTCTCCTCCAGAAGTAAATAATAGCCCACCAGAAACGCAACCTATTGATGAGCAGCATTCAGGAATTGCAATGTTTGCTCAACTTTCCAATCTTAGTGGCAGGTGA 2553 0.461 MSPSKATLLVILLAFSSVPTPAFSAAPVFTFTPKDNFLIDCGAENVPNLPDGRQFKSDPQASSFLQANDDYKVSANNADVPSPIYTNARIFINEAKYSFNLAQPGFHWVRLHFYPIKNNVFDLQKATFSVNTDKYVLLHSFNVNSNDKPILKEFLINATEAQFTISFIPLKNSAAFINALEVVSAPDNLIFDNGAALFPVGEFSGLTNYAFQPLYRLSNGGPMLNTVNDTLGRAWVSDEPFLTSKNLAKSASVSPSAIKYPDNNPSISPLIAPPTVYATATEMGDAKLKQPKFNVSWKFDVDNSFSYLIRMHFCDIVSAGPNELRFNVYINQKMAISELDLSAINGALGVPYYKDMVVNASLMSQGLIVEVGPAKEDGGNVNAIMNGMEIMKISNAVNSLDGEFGVDGKKEAGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWERSKSFSSWLLPLHAGDASFMSGSKTSMGSHKSNFNSSAGLGRYFSFAELQEATKNFDSNAIIGVGGFGNVYLGVIDDGTQVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMANGPFRDHLYGKNLPTLSWKQRIEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFTAKVADFGLSKDTPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCGRAPLSPQLPREQVNLADWAMQWKRKGLLEKIIDPLLVGSINPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQDAFTQGKAGDESKPSAAAVPPSPTPTASISDDRPVSPPEVNNSPPETQPIDEQHSGIAMFAQLSNLSGR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2056 850 FunFam receptor-like protein kinase FERONIA 468 580 - -
Glsi03g2056 850 Gene3D - 211 395 - -
Glsi03g2056 850 Gene3D - 36 186 - -
Glsi03g2056 850 ProSiteProfiles Protein kinase domain profile. 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g2056 850 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g2056 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Glsi03g2056 850 Gene3D Phosphorylase Kinase; domain 1 467 580 - -
Glsi03g2056 850 MobiDBLite consensus disorder prediction 803 818 - -
Glsi03g2056 850 Pfam Malectin-like domain 39 393 IPR024788 -
Glsi03g2056 850 Pfam Protein tyrosine and serine/threonine kinase 509 715 IPR001245 GO:0004672|GO:0006468
Glsi03g2056 850 Gene3D Transferase(Phosphotransferase) domain 1 581 794 - -
Glsi03g2056 850 PANTHER OS07G0166700 PROTEIN 491 781 IPR045272 GO:0004714|GO:0006468
Glsi03g2056 850 FunFam Receptor-like protein kinase FERONIA 581 794 - -
Glsi03g2056 850 FunFam Putative receptor-like protein kinase 36 186 - -
Glsi03g2056 850 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Glsi03g2056 850 MobiDBLite consensus disorder prediction 787 837 - -
Glsi03g2056 850 SUPERFAMILY Protein kinase-like (PK-like) 489 772 IPR011009 -
Glsi03g2056 850 CDD STKc_IRAK 511 775 - -
Glsi03g2056 850 FunFam Receptor-like protein kinase FERONIA 210 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2056 Glsi-ChrGlsi03 81526836 81529388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2056 31 850 Receptor kinase-like Gene Family AT4G39110 66.268 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi03g2056 Malectin_like 1.4e-37 CL0202