Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g2048 ATGGCTTCCTCAAGCGGAACATCTTCTGGGTCGACTCTGGTTGTTCAAAACTCTGGTTCGGAGGAGGACTTGCAGACCCTGATGGATCAGAGGAAGAGGAAAAGGATGATATCAAACCGTGAATCGGCAAGGCGATCTCGAATGAGAAAACAGAAGCACTTGGATGATCTGGTGAATCAGGTGGCTCACCTCAGGAAGGAGAACCAGCAGATACTCACAAGCGTCAATATCACCACCCAACAGTATTTGAGCGTTGAGGCTGAAAACTCAGTGCTGAGAGCTCAAGCGAATGAACTGAGCCACAGACTAGAGTCTCTGAACGAGATCGTCGATTTCTTAAATGCCAGCAATGGAGTTTTTGGAGCTACAGGAGCATCAGAAACGTTGATTGAGCCCGCCAATAGCTTCTTCAACCCATTAAACGTGGCCTATCTGAACCAGCCGATTATGGCTTCTGCAGACATGTTTCCGTACTGA 477 0.4801 MASSSGTSSGSTLVVQNSGSEEDLQTLMDQRKRKRMISNRESARRSRMRKQKHLDDLVNQVAHLRKENQQILTSVNITTQQYLSVEAENSVLRAQANELSHRLESLNEIVDFLNASNGVFGATGASETLIEPANSFFNPLNVAYLNQPIMASADMFPY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g2048 158 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Glsi03g2048 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Glsi03g2048 158 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Glsi03g2048 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Glsi03g2048 158 Coils Coil 47 74 - -
Glsi03g2048 158 MobiDBLite consensus disorder prediction 1 24 - -
Glsi03g2048 158 Gene3D - 29 84 - -
Glsi03g2048 158 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Glsi03g2048 158 FunFam Basic region/leucine zipper protein 29 111 - -
Glsi03g2048 158 MobiDBLite consensus disorder prediction 25 50 - -
Glsi03g2048 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 154 - -
Glsi03g2048 158 MobiDBLite consensus disorder prediction 1 50 - -
Glsi03g2048 158 Pfam bZIP transcription factor 31 78 IPR004827 GO:0003700|GO:0006355
Glsi03g2048 158 Coils Coil 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g2048 Glsi-ChrGlsi03 81471309 81471785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g2048 25 158 bZIP Transcription Factor Family AT4G34590 58.993 1.75e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi03g2048 bZIP_1 3.5e-10 CL0018