Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1980 ATGCTTCATTCTCTTTGTCTTCTTCCTACACTCTCTTCCTCTGTCTCTCCCCTTGGGTCTCGCTCTCGCTCCATTTCTGCAAATCCTAAACCTGTTTACCTGAAGTTCCGAACAGCCTACCGCGAAAACCTCCGTTACCTGAAAGTTCTTGGTGTTATTGACCCCCAAACCAACCCCAACAAGCTCCCTCTTCCCGACGCCGTCGACCACATTCTCGCCACCGTCAATTTCCTCAAATCCAAGGGTTTCGCCGACGCCGATTTCCCTAGACTCGCCTTCCTCTGCCCCCACCTCTTCTCCACTACATTCCAACCCACTGACATTGCTCCCGTTTTCGATTTCTTGGTCCTTGATTTACCTGCCTCTGTTCAGGAATCACGTGGTTTGATCCTCCGGTGTCCCAAGATTCTCTTCTCCGACGTCGAGTTCTGTCTTCAACCCACGCTCCGTTTTCTTCGCCAAATAGGGGTTGAGGACTTGAATCAACCCACCAATTTGAACGCTCATCTATTGAACACTCGGGTGGAGAAACTGCGGACGAAGATTAGGATTTTGCAAAGCATTGGTTTTTCATACGAGGAGGCGGCCAACGCTTGTGCTAGGTTGCCAGCTATTTTTGGCTATGGAATTGAGACTAATCTATTGCCTAAGTTTGAGTATCTAGTGAAAGAGATGAAACGGAGTGTGCAAGAATTGAAGGTGTTTCCTCAGTACTTTGGGTTTAGTTTGGAGAAGAGGATCATGCCAAGGCATCTGCATTTGAAAGAGAGGAAGGTACAGATTCCATTGAACAGAATGTTAATGTGGGGTGATGAAAAATTCTACGCTAAGTGGAAGTGA 840 0.475 MLHSLCLLPTLSSSVSPLGSRSRSISANPKPVYLKFRTAYRENLRYLKVLGVIDPQTNPNKLPLPDAVDHILATVNFLKSKGFADADFPRLAFLCPHLFSTTFQPTDIAPVFDFLVLDLPASVQESRGLILRCPKILFSDVEFCLQPTLRFLRQIGVEDLNQPTNLNAHLLNTRVEKLRTKIRILQSIGFSYEEAANACARLPAIFGYGIETNLLPKFEYLVKEMKRSVQELKVFPQYFGFSLEKRIMPRHLHLKERKVQIPLNRMLMWGDEKFYAKWK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1980 279 Pfam mTERF 124 274 IPR003690 GO:0003690|GO:0006355
Glsi03g1980 279 Gene3D Transcription termination factor 3, mitochondrial 55 279 IPR038538 -
Glsi03g1980 279 SMART mt_12 163 191 IPR003690 GO:0003690|GO:0006355
Glsi03g1980 279 SMART mt_12 196 228 IPR003690 GO:0003690|GO:0006355
Glsi03g1980 279 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Glsi03g1980 279 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Glsi03g1980 279 FunFam Transcription termination factor MTEF1, chloroplastic 38 279 - -
Glsi03g1980 279 PANTHER CGI-12 PROTEIN-RELATED 66 277 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1980 Glsi-ChrGlsi03 81097662 81098501 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi03g1980 mTERF 3.5e-30 No_clan