Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1968 ATGGATCCAACTAGCCGGAAATCCAAGCCCAAACCAAAAGTTATATTGTTCAAGTTCAAATGGCCACAAAAATTGCAGTCTAAAAAAAAAATATGCCAACAAAAGCATAAGCTTAACCTGAGTGACAAGGAAGTAGCAAATTTCAGTGTACAGATGGAGTTCGTTCCTGAAGAAGACAAGTGCCTTCATGAAGATTGCTCCACTTTGATTCTGCCTGCCTTGTCTATTGGAAATGTGGGGCAGCTAGCTGCAGACCTTTTGGTTTCATCTATGGGATCAGAGAGAGTCGGATATTTGGATTATCCTTATGTTCTCCCATGTGTTGGCAATGATGCATATGGACCAGTTCCTCAAGGCGACCTTGCGCTTCCTCTTGAAGGTGATTCTTCGCTTATTCTTTGGTTTGTGACTGCTATAATAATTACACTCAAATTTACTGCTCTTAAAATGCCCAACTCTTTGTTATCGCCTTTTACTGGGTTTGCAGTTTATGATTCTCCTATTAATGCACTCGCTATTCTCCAACAAAGATCTCCAGTCGTTAAGGGTATGATGATTGATTTTGCGAAGAACTTATCTGATTTTGTTGCTGTTTGTGGAAAGAAGCACGTTGTTGTGCTCTCTAGCTTAGATTTTGGGAAGTGGCAAAAAGTTGACATGTCAAGTGGGTTGCAGATATATTACCTCTCTAGTGCCAACAGCGATGGAACAGATGAAAACTGTGAACAACTTGGATGGAAGAAACTTCAGGAATTCAACCCTTCTCAGAAGCATTGGAAATATCTTAACGATTTAGCTCAACGAAATGCAACTGGGGATGATATCTCTCCTTTAGAAGATGAACTAGAAGATGAAAATTATTATGCTAGCTTGCCTTTTGCTGCTCTTTTTTCTTTTCTCAAGGCCAAAGGTGTGAAGGTGACCTGCCTGTTATGTTATTGCTCAGAAGGAGACAACATATCTGATGCTGATCAATTAGCTGAGGCCGCATGCAAACTTCTAAGGCTGAGTCCCAATGGAAGCGAGGGTAGTAAATGGTGTGTTCCGCTTTCTTGGACGACTGTATATGGACCACCCCCAGATGTTTGTTACCACATTGTAGTCATTGTAGCTGATAATTGGCCACTGAGAAGATTATATTTGCAAAGGCCATTATTGTATCTGGAGAGGGAGGGAGTAGGTTCCTTTCTCATAAAACAAAAGAACGACTACTTTCGGCCTTTACGACAAACCCAAACAATGTCTTCCGATCAATCTTCCAAACCCAAACTCCCACTAAGACAAGTCCCCGGCAGCTATGGCCTCCCCTTCTTCGGAGCCATTGCCGACCGCTTCGACTATTTCTACAACCAAGGTCGTGAGAAGTTCTTCTATTCCAGAATCCAAAAATACAAGTCCACCGTTTTCCGAACCAACATGCCACCCGGCCCCTTCAACGCCTCCGACCCACGCGTCATCGCGGTCCTCGACGCCCTCAGCTTCTCCATCCTCTTCGACACCTCCAAGGTCGAGAAACGCGACGTCTTCACCGGAACCTACGTGCCCTCCCTAGCCTTCACCGGCGGCCACCGTGTCTGCGCCTATCTCGACCCCTCCGAACAAAAGCACCACCAAATCAAGAGCTTCTTCTTTTCCCTCCTCTCCTCCCGACACGACCAAATTATCCCGCTCCTCAGGAGCTACTTGTCGGAGGTCTTCCTCAAGCTCCAAGACAAGGTCTCCGACAAAGGCGAAGCTCACTTCAACCCCATCAGCGATCACGAGCTCTTCAACTTCGTGTTTCGCCTCTACTGCGGCAAAGACCCGGCCCAAACTAATCTCGGATCCTGCGGTCCAACACTCTTCGAGCTTTGGGTTTTGCCGCAGGTTGCTCCACTGGGTTCCGCCGGACTGCCCTGGTACTTGTTCCCCATCAACGTGGTAGAAGATTTCCTGCTCCATACGTTGCCGTTTCCGGGTTGGATCCTAAAATGGAACCACAGGAAGCTTTACAAAGCCATCTATACATCCGCCACGGAGGCATTGGATGAAGCTTCGGGTTTTGGGCTGAGCAGAGAAGAAGCCTGCAATAACATACTGTTCGTTCTGGGTTTCAACACTTACGGAGGAGTGAAGATAGTGGTCCCCACTATGATGAAGTGGGTGGGATTAGCTGGAAAGGGTCTACACAAGAGGCTAGCCGAGGAGATCAGGAGCGTGGTTAAAGAAGAAGGAGGGGTTAGCTTGAGCGCGTTGGAGAAAATGGCTTTGGTTAAATCAGTGGTGTGGGAGGTGCTGAGGATCGAACCCCCGGTACCGTACCAGTACGGAAAGGCAAAGGAGGATATAGTTGTACAGAGCCACGACGCAGCGTTTAAGATCAAGAAAGGGGAGATGATATTTGGGTTTCAACCTATCGCTACGAAGGACGGGAGGGTGTTCGAGAGACCGGAGGAGTTTATAGGGGACAGGTTTGTGGGAGAAGGGGAGAAGCTTCTGAAGTACGTATATTGGTCGAATGGGAGGGAGACGGAGCGTCCGACAGCAGAGAACAAGCAGTGTCCCGGGAGGGATCTGGTGGTGCTGATGCTTAGGGTAATATTAGTGGAGCTGTTCCTGAGGTACGACACGTTTCGGGTGGAACTTGGATTCCCCACGCTCGGTCCTTCCGTTACCATTAAGTCCTTGACCAAGGCCACTACCGTTTAA 2688 0.4766 MDPTSRKSKPKPKVILFKFKWPQKLQSKKKICQQKHKLNLSDKEVANFSVQMEFVPEEDKCLHEDCSTLILPALSIGNVGQLAADLLVSSMGSERVGYLDYPYVLPCVGNDAYGPVPQGDLALPLEGDSSLILWFVTAIIITLKFTALKMPNSLLSPFTGFAVYDSPINALAILQQRSPVVKGMMIDFAKNLSDFVAVCGKKHVVVLSSLDFGKWQKVDMSSGLQIYYLSSANSDGTDENCEQLGWKKLQEFNPSQKHWKYLNDLAQRNATGDDISPLEDELEDENYYASLPFAALFSFLKAKGVKVTCLLCYCSEGDNISDADQLAEAACKLLRLSPNGSEGSKWCVPLSWTTVYGPPPDVCYHIVVIVADNWPLRRLYLQRPLLYLEREGVGSFLIKQKNDYFRPLRQTQTMSSDQSSKPKLPLRQVPGSYGLPFFGAIADRFDYFYNQGREKFFYSRIQKYKSTVFRTNMPPGPFNASDPRVIAVLDALSFSILFDTSKVEKRDVFTGTYVPSLAFTGGHRVCAYLDPSEQKHHQIKSFFFSLLSSRHDQIIPLLRSYLSEVFLKLQDKVSDKGEAHFNPISDHELFNFVFRLYCGKDPAQTNLGSCGPTLFELWVLPQVAPLGSAGLPWYLFPINVVEDFLLHTLPFPGWILKWNHRKLYKAIYTSATEALDEASGFGLSREEACNNILFVLGFNTYGGVKIVVPTMMKWVGLAGKGLHKRLAEEIRSVVKEEGGVSLSALEKMALVKSVVWEVLRIEPPVPYQYGKAKEDIVVQSHDAAFKIKKGEMIFGFQPIATKDGRVFERPEEFIGDRFVGEGEKLLKYVYWSNGRETERPTAENKQCPGRDLVVLMLRVILVELFLRYDTFRVELGFPTLGPSVTIKSLTKATTV 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1968 895 Gene3D - 65 259 IPR038389 -
Glsi03g1968 895 Pfam PAC2 family 69 333 IPR019151 -
Glsi03g1968 895 SUPERFAMILY Cytochrome P450 425 873 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 PRINTS E-class P450 group IV signature 847 865 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 PRINTS E-class P450 group IV signature 748 764 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 PRINTS E-class P450 group IV signature 801 819 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 PRINTS E-class P450 group IV signature 785 799 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 Gene3D - 284 366 IPR038389 -
Glsi03g1968 895 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 52 362 IPR016562 -
Glsi03g1968 895 FunFam Allene oxide synthase, chloroplastic 424 894 - -
Glsi03g1968 895 Pfam Cytochrome P450 723 869 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1968 895 CDD CYP74 458 887 - -
Glsi03g1968 895 Gene3D Cytochrome P450 420 894 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1968 Glsi-ChrGlsi03 81032841 81042440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1968 406 893 Cytochrome P450 AT5G42650 51.111 9.02e-170 501