Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1955 ATGAGGGGAAAACTGTGTTATGTAAATGAACTGGTATTTTTGGAATGGCAGCTCCATTCCACTTGTGTTAATACTCTTCTATGTTTTGCATTTTCTTTACCAGTTTACTTGAGAGTCCTCATGCAAAAGCCATCTGCTTCAATTGCTTTTCCTCTCTTTTTTGGGAATCCCCAATTGGGATGGGTTAATGCAAAATTAGTTGTGCCACTTCCTGTAAGCAGCCTTGGCTTTCCAAGGTTGTCAACTATGGCTAGCCCTCGTTGCTTTCTCTTCTGCTCCCTCCTTCTCTCTTCTGTCTCTGCTTTCTCTTACGCTCTCTCTGATGCCGAAGCTTCCCTCATTGCTCGCCGCCAACAGTTGGCGTTAAAGAAAAATGGTGATATTTCTATGGAGTTTGGATTTGAAGTTAAAACTCATCAAAATATTGCCAGTGGAAGGCTCAAGAGAGCCTATATTGCTCTTCAGGCATGGAAAAATGCCATATATTCTGATCCTTTGAACACAACTGGCAATTGGTTTGGCGAGGATGTTTGTTCCTATAATGGTGTTTTCTGTGCTGTAGCCATTGACGACCCCAACTTACAAGTAGTTGCTGGTATTGATCTTAATCATGCAGACATGGCAGGGTACCTCCCAGAAGAGTTGGGCCTTTTGACGGACATGGCCCTTTTCCACATTAACTCTAATAGATTCTGTGGAATTATCCCAAAGAGCTTCGAGAAGCTCACTCTTATGTATGAGTTTGATATCAGCAACAATCGCTTTGTTGGTGATTTTCCTTCTGTGGTGCTTGCATGGCCAAGCTTGAAGTATTTGGATGTAAGATTCAATGACTTTGAAGGACCTTTGCCTCCACAGTTGTTTGAGAAAGACTATGATGCAGTGTTCTTGAACAATAATCGCTTCACGTCTACGATCCCAGAAAATATTGGCGAATCTACGGCTTCGGTTGTGAGCTTCGCTAACAATAATTTTTCTGGTTGCATTCCAAAATCTATTGGGAACATGGTGAACTTGAATGAGATTGTCTTTTTGGGCAATAACCTTGGTGGTTGCTTCCCTCAAGAGATTGGATTGCTAGGAAATATGTCAGTTTTTGATGCTAGTCATAATGGGTTTATAGGGACTTTGCCTAACTTGTCAGGTTTGAAGAGTGTGGAGATCATAGATATCACAAAGAACAAGATTTCTGGGTATGTGTCTGACACCATTTGCAAGCTGCCTAAGTTGAACAAATTCAAATTTGCTGACAACTTTTTCAACGGAGAAGCCGCATCTTGTTTACCTTCTCCTAAGGTGAATGTTGTTTTCGACGACGCCAACAACTGTTTGAAAGGAAGGCCGAAACAGAAGACAACCAAGGCATGCTTAACGGTGGTGACAAGTTATGTGGATTGTAGCAAGAATTGCGGCGGGGGTGGCCATGCCCCCTCACCAAAGCCAGTGAAAGATACCCCTCCAACATCAGTTGTCTACCCTCCACCACCACTTGTTTACTCTCCTCCGGTCTACTCTCCATCACCACTAGTTCACTCTCCACCACCTCCAGTCCGCACTCCTCCACCACCACCGGTTCACTCTCCACCACCACTTGTTCACTCTCCTCCACCTCCTGTCCACTCTCCACCACCACCTGTTCACTCTCCTCCACCTCCTGTCCACTCTCCACCACCACCTGTTCACTCTCCTCCTCCCCCGGTTCACTCCCCACCGCCACCGATTTACTCTCCTCCTCCCCCAGTCCACTCGCCACCTCCACCAGTTCAGTCTCCTCCTCCCCCAGTCCACTCTCCACCGCCACCAGTTCATTCTCCACCTCCACCGGTTCAGTCTCCTCCTCCCCCAGTCCACTCTCCACCACCACCATTTCACTCTCCACCTCCACCGGTTCAGTCTCCTCCTCCCCCTGTCTTGCATGCACCATCACCAAAATGGGATGATGATGTCATTCTTCCACCGGTCTTCGGGGCCCAATACAGTTCGCCGCCTCCCCCAGCAATCGTGGGATACTAA 2013 0.4694 MRGKLCYVNELVFLEWQLHSTCVNTLLCFAFSLPVYLRVLMQKPSASIAFPLFFGNPQLGWVNAKLVVPLPVSSLGFPRLSTMASPRCFLFCSLLLSSVSAFSYALSDAEASLIARRQQLALKKNGDISMEFGFEVKTHQNIASGRLKRAYIALQAWKNAIYSDPLNTTGNWFGEDVCSYNGVFCAVAIDDPNLQVVAGIDLNHADMAGYLPEELGLLTDMALFHINSNRFCGIIPKSFEKLTLMYEFDISNNRFVGDFPSVVLAWPSLKYLDVRFNDFEGPLPPQLFEKDYDAVFLNNNRFTSTIPENIGESTASVVSFANNNFSGCIPKSIGNMVNLNEIVFLGNNLGGCFPQEIGLLGNMSVFDASHNGFIGTLPNLSGLKSVEIIDITKNKISGYVSDTICKLPKLNKFKFADNFFNGEAASCLPSPKVNVVFDDANNCLKGRPKQKTTKACLTVVTSYVDCSKNCGGGGHAPSPKPVKDTPPTSVVYPPPPLVYSPPVYSPSPLVHSPPPPVRTPPPPPVHSPPPLVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIYSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPFHSPPPPVQSPPPPVLHAPSPKWDDDVILPPVFGAQYSSPPPPAIVGY 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1955 670 Gene3D Ribonuclease Inhibitor 188 477 IPR032675 -
Glsi03g1955 670 MobiDBLite consensus disorder prediction 507 641 - -
Glsi03g1955 670 PRINTS Proline rich extensin signature 527 544 - -
Glsi03g1955 670 PRINTS Proline rich extensin signature 475 496 - -
Glsi03g1955 670 PRINTS Proline rich extensin signature 545 570 - -
Glsi03g1955 670 PRINTS Proline rich extensin signature 509 525 - -
Glsi03g1955 670 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 150 448 - -
Glsi03g1955 670 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 91 665 - -
Glsi03g1955 670 MobiDBLite consensus disorder prediction 507 670 - -
Glsi03g1955 670 Pfam Leucine rich repeat N-terminal domain 153 185 IPR013210 -
Glsi03g1955 670 SUPERFAMILY L domain-like 151 448 - -
Glsi03g1955 670 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1955 Glsi-ChrGlsi03 80947576 80951003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1955 82 469 Trihelix Transcription Factor Family AT3G19020 65.649 0.0 541