Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1922 ATGATAAGGCCAGTCCTCTTCACTGTCATTGCCCCCCCTCCAAGTAAATATCTTTGTGCACTAGTTAAACCACATTACCCATCATCGGTGAATGCTGTTAGCCATTCGTTCCCATTATCTCTTTCCTTTCTTCCAAATAAGCCTCCTTTTCTTCCCTCTCTGAGAAAGGCAAAGCCTTCAGGTTCGGATTCTAGCTCATCCATTTCCACCATGGATTCAAGCTCTACCGACGATGAAGTGGCCTATGACCTCTCCCCCATTATGAAAGTGTACAAAGACGGTCGTGTAGAGAGACTTGCAGGCGAAGAGGTTACTCCTCCGTCCGTCGACCCCATAACCAACGTTGAATCCAAAGACGTTGTGATTTCAAAACAAGACGGCATATCTGCTAGGCTTTTCCTTCCTAAAATCACTAACCCAGATCAAAAACTCCCTCTCTTTGTTTACTTCCATGGCGGGGCCTTCTGTATCGAAACCCCCTTCTCACCAAACTACCACAACTACGTTAACTCCGTGGCTTCTCAAGCAAATATCATCGGCGTCTCTGTCCATTACAGGAGGGCGCCGGAGCACCCTGTTCCCATCGCTCACGAAGATTCATGGACTGCCGTCAAATGGATCGCTTCCCATTTTGGTGGAAATGGGCCCGATGAGTGGCTGAATCGCCATGCCGATTTGGGGAAGGTGTTCTTCGCTGGGGACAGCGCGGGTGCTAATATTGCACACCACATGGCAATTCGGGTTGGCACAGAAGGATTGGCGGGTGTAAAGCTCGAAGGGGTTGCTCTGGTGCATCCATATTTTTGGGGCGTAGAGCGAATCGGGTCCGAGTCGAATCGATCTGAACATGCATCCAAGGTGGATGATTTATGGCGTTTTTCGTGCCCAACCACATCTGGATCTGACGACCCATTGATCAACCCGGCTAAGGATCCGAAACTGGGAAGCATGGCTTGTAGCAGAGTGCTTATTTGTGTTGCCGAGAAGGATTTGTTGAAGGAAAGAGGTTGGTATTACAAGGAACTGCTGGAAAAGAGTGGGTTCTTTGGAGTTGTGGAGGTGATGGAGGCAAAAGATGAAGAACACGTGTTTCATATGTTCAAGCCAAGCTGTGAGAATGCTCTGGCTATGCTCTGCCGTATTGTTTCCTTTATCAAACAAGATTAA 1167 0.4833 MIRPVLFTVIAPPPSKYLCALVKPHYPSSVNAVSHSFPLSLSFLPNKPPFLPSLRKAKPSGSDSSSSISTMDSSSTDDEVAYDLSPIMKVYKDGRVERLAGEEVTPPSVDPITNVESKDVVISKQDGISARLFLPKITNPDQKLPLFVYFHGGAFCIETPFSPNYHNYVNSVASQANIIGVSVHYRRAPEHPVPIAHEDSWTAVKWIASHFGGNGPDEWLNRHADLGKVFFAGDSAGANIAHHMAIRVGTEGLAGVKLEGVALVHPYFWGVERIGSESNRSEHASKVDDLWRFSCPTTSGSDDPLINPAKDPKLGSMACSRVLICVAEKDLLKERGWYYKELLEKSGFFGVVEVMEAKDEEHVFHMFKPSCENALAMLCRIVSFIKQD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1922 388 PANTHER ARYLACETAMIDE DEACETYLASE 85 372 - -
Glsi03g1922 388 MobiDBLite consensus disorder prediction 54 77 - -
Glsi03g1922 388 Gene3D alpha/beta hydrolase 80 388 IPR029058 -
Glsi03g1922 388 SUPERFAMILY alpha/beta-Hydrolases 75 387 IPR029058 -
Glsi03g1922 388 Pfam alpha/beta hydrolase fold 147 366 IPR013094 GO:0016787
Glsi03g1922 388 MobiDBLite consensus disorder prediction 58 77 - -
Glsi03g1922 388 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 229 241 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1922 Glsi-ChrGlsi03 80763832 80764998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1922 77 386 Carbohydrate Esterase AT3G48690 47.500 5.83e-103 305