Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1907 ATGGAGATTGTTACTATTTTAGTATATTTATTCCTTTTTCTCTCAGCCCTCCTTTGGTGTCACTTAACAAAGAAACACGAGAAACCCAAAAGTAGAGCTAAGCTTCCCCCAGGCTCGATGGGTTGGCCTTATATAGGAGAGACTCTTCAACTATACTCTGAGGACCCCAATGTCTTTTTTGCTTTAAAGCAGAAAAGATATGGAGAAATTTTTAAAACCCACATACTTGGCTGTCCTTGTGTGATGCTGGCTAGCCCTGAGGCTGCGCGCTTTGTGCTGGTGACCCATGCTCACTTGTTCAAGCCCACATACCCCAAAAGCAAAGAGAAGCTCATAGGCCCTTCTGCATTATTCTTTTACCAAGGAGACTATCATACTCGAATTAGGAAGCTGGTCCAGACTTCACTTTCTCCTGAAAGAATCCGAAAATTGATCCCTCACATCGAAACTGAGGCCATCTCCACTTTGGAGTCCTGGGTTTCTGGTGCACAAGTCATTAACGTTTTCCAGGAAATGAAAAAGTTCTCTTTCAATATCGGCATCCTCTCTGTGTTTGGTCACTTGGAGGGCAATTATAGAGAGCAGCTTAAGGAGAACTACTGCATAGTAGAGAAAGGCTACAATTCTTTCCCAAACAGGATACCAGGAACTGCATACTCGAAGGCTTTCTTGGCGAGGTGGAGAATCCGAGAGATTATTAGTGAGATCATTTGTAAGAGAAAAAAGGAACAGAGGTTGATGGAGAATGACCTCTTGGGGCACTTGTTGAACTACAAGGATGACAAGGGCCAGACACTAACTGATGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGACACAACAGCCAGTGCTTTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGAAATAAAAGCAGAGCAAATGGCCATATATAAAGCCAATGAAGGAGGGAAGAAACCCTTGACATGGGATCAGACCAGAAAGATGCCAATTAGTTTTAGGGTGATATTGGAAAGCCTGAGAATGGCAAGCATCATATCTTTTACCTTTAGGGAGGCTACGGTTGATGTAGTGTACGAGGGATATCTCATACCAAAGGGTTGGAAAGTGATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCATCCAGCTCCTCTCAATTTTGACCCATCAAGGTTTGAGGTTGCACCAAAGCCCAATACTTTTATGCCATTTGGGAACGGAGTGCACTCTTGTCCTGGAAATGAGCTTGCCAAGTTGAACATGCTGATTTCAATTCACCACTTAGTAACCAAATTAAGGTGGGAAGTGGTGAAATATCATAATGGAATTCAGTATAGCCCATTTCCAGTCCCTATTCATGGTCTACCTGCAAAATTTTGGACAAACCAGTAA 1413 0.426 MEIVTILVYLFLFLSALLWCHLTKKHEKPKSRAKLPPGSMGWPYIGETLQLYSEDPNVFFALKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFYQGDYHTRIRKLVQTSLSPERIRKLIPHIETEAISTLESWVSGAQVINVFQEMKKFSFNIGILSVFGHLEGNYREQLKENYCIVEKGYNSFPNRIPGTAYSKAFLARWRIREIISEIICKRKKEQRLMENDLLGHLLNYKDDKGQTLTDDQIADNVIGVLFAAQDTTASALTWILKYLHDDQKLLEEIKAEQMAIYKANEGGKKPLTWDQTRKMPISFRVILESLRMASIISFTFREATVDVVYEGYLIPKGWKVMPLFRNIHHNPEFHPAPLNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMLISIHHLVTKLRWEVVKYHNGIQYSPFPVPIHGLPAKFWTNQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1907 470 FunFam Abscisic acid 8 25 468 - -
Glsi03g1907 470 CDD CYP90-like 64 465 - -
Glsi03g1907 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PANTHER CYTOCHROME P450 26 32 457 - -
Glsi03g1907 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Glsi03g1907 470 SUPERFAMILY Cytochrome P450 31 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 Pfam Cytochrome P450 36 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 Gene3D Cytochrome P450 24 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi03g1907 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1907 Glsi-ChrGlsi03 80667044 80669533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1907 11 466 Cytochrome P450 AT3G19270 70.000 0.0 675