Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1903 ATGGGGTCACACATGAACTTCAAGAGCTTTGGTGATACTGATAACACCATAGGGGATAGCAGCAGTAGGAAGCCACCGGAAAATGTCACATTGGTGAGGCAGCCATCAATATACTCCCTGACTTTTGATGAGCTCCAGAACACAATTGGTGGGATTGGAAAGGATTTTGGATCCATGAACATGGATGAACTCTTAAAGAACATATGGACAGCTGAAGAGTCTCAAGCATTGGCAGTGGCATCTTCAGCTGGTGGAGGAGGAGGAGGAGAAGGTAATAATAATAATAACCCAAGTGGGAATTTGCAGAAACAAGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGATTTGATCAAAGATAGTGGTGTGGCAGATGGGAATGGGAGTGGGAGTGGTGGGTCAGGCTCAACTATGCCTCAAACTCAGAGGCAACAAACTTTAGGTGAAGTGACTTTAGAGGAGTTTCTGGTGAGAGCTGGGGTTGTGAGAGAAGACATGCCTCAACAATTTGCAAGACCGAACAGTAATCTATGGTTTGGTGACTTGTCCAGACCAAACAACAACACTGGTCTACTTCTCGGGTTTCAACAGCCAAACGGGAATAAGGGGAATTTGGGTAATGGCAATACTCCAGTTTCCAGACATCCTCCCGCTCTGTCATTACACGCAGACCCTACTAACCCGCAGCAACAAGCCCAACACCAGCAGCACCAGCAGCCGCCGCCACTTTTCCCCAAACCAGCAAATGTGGCTTTTGCCCCTTCTGTGCATTTGCTGAACAATGCTCAACTGGCTAGCTCCGGCACAAGGGGAGGGATGATCGGAGTTCAGGGCGGTGCAGCACTACCAAGTGTTGCAGTGGCCAGTGGGTCTCCGGCAGGTCAGATATCGCCGGAAGTTTTTACAAAGAGTACTGTGGATACGTCTTCTCTCTCGCCGGTTCCATATGTGATAAACAGGGGAAGGAAGTGCAGTGCTATAGAGAAAGTGGTTGAGAGGAGACAAAGGAGAATGATCAAGAATAGAGAATCAGCTGCCAGGTCACGAGCTCGTAAGCAGGCCTATACTTTAGAACTGGAAGCTGAAGTTCAAAAACTCAAGGAAATGAACAGAGAATTAGAAACAAAACAGGCTGAAATTATGGAAATGCAGAAAAACCAGGCTTTGGAGACAATGTATCGGCCATGGGGGTGTAAAAGACAATGTTTGAGAAGGACACTTACAGGTCCATGGTAG 1260 0.4714 MGSHMNFKSFGDTDNTIGDSSSRKPPENVTLVRQPSIYSLTFDELQNTIGGIGKDFGSMNMDELLKNIWTAEESQALAVASSAGGGGGGEGNNNNNPSGNLQKQGSLTLPRTLSQKTVDEVWRDLIKDSGVADGNGSGSGGSGSTMPQTQRQQTLGEVTLEEFLVRAGVVREDMPQQFARPNSNLWFGDLSRPNNNTGLLLGFQQPNGNKGNLGNGNTPVSRHPPALSLHADPTNPQQQAQHQQHQQPPPLFPKPANVAFAPSVHLLNNAQLASSGTRGGMIGVQGGAALPSVAVASGSPAGQISPEVFTKSTVDTSSLSPVPYVINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTLELEAEVQKLKEMNRELETKQAEIMEMQKNQALETMYRPWGCKRQCLRRTLTGPW 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1903 419 CDD bZIP_plant_BZIP46 341 395 - -
Glsi03g1903 419 MobiDBLite consensus disorder prediction 135 152 - -
Glsi03g1903 419 MobiDBLite consensus disorder prediction 79 114 - -
Glsi03g1903 419 Pfam bZIP transcription factor 341 392 IPR004827 GO:0003700|GO:0006355
Glsi03g1903 419 MobiDBLite consensus disorder prediction 204 254 - -
Glsi03g1903 419 SUPERFAMILY Leucine zipper domain 341 389 IPR046347 GO:0003700|GO:0006355
Glsi03g1903 419 MobiDBLite consensus disorder prediction 204 222 - -
Glsi03g1903 419 MobiDBLite consensus disorder prediction 87 114 - -
Glsi03g1903 419 SMART brlzneu 337 403 IPR004827 GO:0003700|GO:0006355
Glsi03g1903 419 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 339 396 - -
Glsi03g1903 419 Coils Coil 360 394 - -
Glsi03g1903 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 344 359 IPR004827 GO:0003700|GO:0006355
Glsi03g1903 419 MobiDBLite consensus disorder prediction 231 247 - -
Glsi03g1903 419 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 419 IPR043452 GO:0003700|GO:0045893
Glsi03g1903 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 390 IPR004827 GO:0003700|GO:0006355
Glsi03g1903 419 MobiDBLite consensus disorder prediction 1 30 - -
Glsi03g1903 419 Gene3D - 339 396 - -
Glsi03g1903 419 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1903 Glsi-ChrGlsi03 80633612 80635584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1903 1 419 bZIP Transcription Factor Family AT3G19290 52.561 1.08e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi03g1903 bZIP_1 2.2e-11 CL0018