Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi03g1893 | ATGCAAGGTCAAAGAAGGACTGTTGGGTCCTTCCCAGCAATTGTTAGTATGATGCAGGGGCCTAGTGCTAGTGGCACTGATATGAATGGGCAGACTTCCCTGAATCATGTGCAAAATGCAGTAGATACCCGATTTTCAGATTATATGGGATCTTCTGGTGAGACAGCATGTTTACTTGCTACTAATCCTGATGTTCAGAGCTTCAGTGGCTGGAATACTGGTGAAACGAGTTCTAGACTGGATCTGCACAACCAAGTCAGTAATGATGGGCTTAAAACAGAACATGGTTGGTCTTCTTCTAGTAGTGCTCCTGCTGAGGGACCAGAAGAAAGGCGATTTGAACCAAATAATGTAATCTCGCCTTTTAGTTCAAATACTAATTTACATGGGAATCAATCCAGTACTCAACCTCACTCTTCACAAGGTTCAAGCACCAATCATATAACCTCGAATGTGAATGTAAACATGGGGCACATTGCCAATACTGCTAATCGTGGGAAGGGAACCGAAACTGGTGGAGGTGTTAATATCCACAATGCCGGTGGATCAGATAGAGGGCATAAATCATTTGGCAGTGCTTCATGTGATTATATAGGAACTTCATCCAGAAGCTCTGGTCACATGGTTTGGGGAGATAGTGCCAGTTCTAGTTCTTCTTTAGTAAATTGGGGTTCTTCCTGCAAGAGAAAAGCCTTTGAAGATAGTTCTGGGCCACAGTGTACTGGAGAAAGCTCAAGCACTTTTGTAGAATCTGAAAACAGCTTCTGGCCTACTGGTCCTGCTCTAAATGCTTCCAGCAGTTTAAGTGTTTCAGCACCTTCAGAGGATGCTCCTCTTACTACTCCATTACAGCATAACCGAAGAAGTGAGGTTTGGCAAGCTGCTTCTGAGGCATTCCCCTTGATAAGTGTTGTGGGAAATGTGGAAAGGCCTCTAAGAAGCTTTGATAGGAGTATAACCCATGTACAGCGTCAGGAATCTATACCTTTGAATTTATCATCAACAGGGAGATCTAGGCATTCTAATCACTCTTCTGTCCACCAAATATCTGGCTCTAATCCATTTAATGATTCTCTGGAATTGAGGTTAACAGCTGGAATAACAGCAGCCAATTCTGTTGCTCCTCAGAACCAGTCGCTTCCCCTGCATGTGCCTGGTTTTTCAGGGAACACACATCCTTTTCCTTGGAATGGAGCTGCCAATCTAAGAGGGGCCACTTCATCAACTTCTTATAACTCTGGAGAAAGAGCAGTGCGGGAAGAACTAAACTTAAGGATCCTCCAGGGAGACAGTACTCAGCACCCCATGCATGTGCTTGCGTCTTCAGGACATGACCCTACAAGTTGGCATATGTCCTCTGGTAATGTGAACAATTCTGGAGCTCTACCCCCCACATCATGGATTGGATCTAGTCCAAGTGTCCATTCATTGCCTAATCCTAGATGGATTGTTAACCATGAAGTCCCAATGCAGAATCTGCAAAGATTATCAGAGTTCAATCCTTGGTCCCTTTTCCCATCTGGTGTTCATAATGGCCACTCTACCTCATCGCTTTCTGGCCATCCTGCCTCTACTCAGGATACTAGCAACCACCAACCATATGCTAGATCAGCATCATCGATGGGGAGAAGGGGTGATGATGTTTTCAGTGCGCCCCATTCATTGCAAACTTTTGCTGTTGACATTGAGGGGAGACGCCGACTAATATCTGAGATTCGCCAAGTCTTGAATGCAATGCGCAGGGGTGAGAACTTACAAGCTGAGGATCATTTGCTTTTTGACCCTTTCATATTTCATGGTATGGCTGAAATGCATGACAGGCACAGAGATATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGTTGGCATTAGAGGAGCGCATAGGAGATGTGAACACTGGATTAAATGAGGATATCATTATGAAGTTGATGAAACAACGAATATATGTCTATATCATGACAGAGTCGTCTACAGATCTGGAACCTTGCTGTATCTGTCAGGAGGAATATGCTGATGGAGAAGACGTTGGTTCACTAGATTGTGGGCATGAATTCCACATCAACTGCATCAAGCTGTGGCTAATGCAGAAGAATCTTTGCCCCATTTGCAAAACAACAGCTTTAGCTACATGA | 2139 | 0.4413 | MQGQRRTVGSFPAIVSMMQGPSASGTDMNGQTSLNHVQNAVDTRFSDYMGSSGETACLLATNPDVQSFSGWNTGETSSRLDLHNQVSNDGLKTEHGWSSSSSAPAEGPEERRFEPNNVISPFSSNTNLHGNQSSTQPHSSQGSSTNHITSNVNVNMGHIANTANRGKGTETGGGVNIHNAGGSDRGHKSFGSASCDYIGTSSRSSGHMVWGDSASSSSSLVNWGSSCKRKAFEDSSGPQCTGESSSTFVESENSFWPTGPALNASSSLSVSAPSEDAPLTTPLQHNRRSEVWQAASEAFPLISVVGNVERPLRSFDRSITHVQRQESIPLNLSSTGRSRHSNHSSVHQISGSNPFNDSLELRLTAGITAANSVAPQNQSLPLHVPGFSGNTHPFPWNGAANLRGATSSTSYNSGERAVREELNLRILQGDSTQHPMHVLASSGHDPTSWHMSSGNVNNSGALPPTSWIGSSPSVHSLPNPRWIVNHEVPMQNLQRLSEFNPWSLFPSGVHNGHSTSSLSGHPASTQDTSNHQPYARSASSMGRRGDDVFSAPHSLQTFAVDIEGRRRLISEIRQVLNAMRRGENLQAEDHLLFDPFIFHGMAEMHDRHRDMRLDVDNMSYEELLALEERIGDVNTGLNEDIIMKLMKQRIYVYIMTESSTDLEPCCICQEEYADGEDVGSLDCGHEFHINCIKLWLMQKNLCPICKTTALAT | 712 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 231 | 253 | - | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 237 | 253 | - | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 512 | 546 | - | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 332 | 353 | - | - | |
Glsi03g1893 | 712 | Pfam | Ring finger domain | 665 | 706 | IPR001841 | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 512 | 537 | - | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 88 | 105 | - | - | |
Glsi03g1893 | 712 | FunFam | E3 ubiquitin-protein ligase MBR2 | 632 | 710 | - | - | |
Glsi03g1893 | 712 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 629 | 710 | IPR013083 | - | |
Glsi03g1893 | 712 | ProSiteProfiles | Zinc finger RING-type profile. | 665 | 706 | IPR001841 | - | |
Glsi03g1893 | 712 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 223 | 710 | IPR045191 | GO:0061630 | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 117 | 169 | - | - | |
Glsi03g1893 | 712 | SMART | ring_2 | 665 | 705 | IPR001841 | - | |
Glsi03g1893 | 712 | MobiDBLite | consensus disorder prediction | 88 | 188 | - | - | |
Glsi03g1893 | 712 | SUPERFAMILY | RING/U-box | 645 | 709 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi03g1893 | Glsi-ChrGlsi03 | 80581597 | 80584946 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi03g1893 | 1 | 712 | C3H Transcription Factor Family | AT2G15530 | 34.367 | 9.14e-104 | 331 |