Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1890 ATGGCAACAACCGGTGATCAGAATCAAACTGAAGCAGGGAGGCACCAAGAGGTTGGGCACAAGAGCCTTTTGCAGAGTGATGCCCTCTACCAGTATATACTGGAGACCAGTGTGTACCCAAGAGAACCTGAAGCCATGAAGGAGCTCAGAGAAATAACAGCCAAGCACCCTTGGAACATCATGACAACCTCAGCAGACGAAGGGCAATTCTTGAACATGCTCCTTAAGCTTATCAATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGCTACTCCCTGCTTGCCACTGCCCTGGCTCTTCCTGAAGATGGAAAGATCCTGGCCATGGACATCAACAGAGAAAACTACGAACTGGGTCTGCCCGTGATTCAGAAAGCTGGTGTTGCCCACAAAATTGAATTCAGAGAAGGCCCCGCTCTCCCTGTCCTTGACGAACTCGTTCAAGACGAAAAGAACCATGGGAGCTTCGATTTCATCTTCGTGGATGCGGACAAGGACAATTACCTCAACTATCACAAAAGGCTGATTGATCTTGTCAAGGTTGGGGGTGTGATCGGGTACGACAATACCTTGTGGAATGGCTCTGTAGTTGCACCCCCCGATGCTCCTCTTAGGAAGTATGTGAGGTATTACAGGGACTTTGTGTTGGAGCTGAACAAAGCTTTGGCTGTGGACCCCAGGATCGAAATCTGCATGCTACCCGTTGGTGATGGGATCACTCTCTGCCGTCGGATCAAGTGA 744 0.496 MATTGDQNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELREITAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIEFREGPALPVLDELVQDEKNHGSFDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1890 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Glsi03g1890 247 CDD AdoMet_MTases 85 186 - -
Glsi03g1890 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Glsi03g1890 247 PANTHER O-METHYLTRANSFERASE-RELATED 20 246 - -
Glsi03g1890 247 FunFam Caffeoyl-CoA O-methyltransferase 1 15 247 - -
Glsi03g1890 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Glsi03g1890 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1890 Glsi-ChrGlsi03 80573475 80574611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1890 6 246 Monolignol Biosynthesis Gene Families AT4G34050 90.456 1.18e-170 470