Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1881 ATGGGATTGGGAACCATCTCTTTGTGTTTGCCATTCTTGTTTTCTGCTTTCGTGCTTCTTTCTTCATATGTGCGCAATGCCGTCGCTGAAGAGCTGCTTCCCTCAAACAGGAAGGCTTTGGAAGTTATCATAGGAGGTGGCGGCGGTGGCAATAGTGGTTATGCTCCTGCTCCTTTCCCTGAATGTGAATGTCAAGAGCCTCCACCTTCCCCTCCCCCTCCTCAGCCTTCATGTCCTCCACCACCTTCCCCTCCTCCTCCCGTATGTCCTCCTCCAACTTCTCCACCACCGCCGCCGCCAAAACCACCTACAGTAAACCGGGTGGAGAGAGCGCGCCGGGTGCTTCTAAAATTCAAGCTCAATATTAATGACCCAAAAGGGTATACGAGAAACTGGAACGAAACTAACGACCCTTGTCATTTCAACGGGATCCGTTGCGCGGAATACCCAAACTCAAAGCAGCAAGCAGTGGCCGGAATAGACTTAAACGGAGCTGGGATCTCAGGCAAAGGTAAAGATTTAACCCTCTCAGGCATCTTAGACAAGATACCAGACTTAACATTCTTCCATGTAAACTCCAACAAGTTCAGCGGTGCCATCCCAAATGAAATCGTCAAATACCTCTATTTCTTTGAGCTGGACCTCAGCAACAACAAGATGGTTGGCCAGTTCCCAAAGGAAGTGCTTCAATCCAAGAGGCTAGTCTTCCTAGATCTCAGGTTCAACCAACTCCAGGGACCAGTTCCTCCAGAACTGTTCCAATTGGACCTAGACGTGATTTTCATTAACAACAACCAGTTCAGTCAAAATCTTCCTGATAATTTCGGGTCCACCCGTGCTCGTTTTCTCACATTCGCCAACAACAAGCTTACTGGTCCAATCCCCAGAAGCATTGGCAAAGCTTCCAAGACTCTCACTGAAGTGCTTTTTCTAGGCAACTATTTCTCTGGGTGCTTGCCATATGAGATCGGGTACCTCAAGAAGGCCAGAGTTTTTGATGTGAGTAGAAACTGGTTGACGGGTCCAATCCCCAACTCCTTTGCCTGCTTAGAAAATATTCAGTTCCTGAATTTGACTGATAATCAATTCTATGGCACTATTCCGGAGATGGTTTGCCAGCTTCCAAAACTGCGCAACAACGGCAATTTGTCCTTATCAGGCAACTATTTCACCCAGGTTGGACCTGAATGCAGGAAGCTGATAATGTCGAATGTGCTTGATGTGAAGAAAAATTGCATTTTGGGGCTTCCAAATCAAAGACCAGAAGCTCAGTGTACTGATTTTTTCTCAAAGGTCAAGCCTTGCCCGGACCAGAAGGCTTTGAACCTCGTCCCTTGCAAGAAATATTATTCAAGCTCACAGAGGACCACACTTGACCCTGAAACATCGGCTTCACCTCCGGCGCCGGTAACCTACAAGTCTCTGAACCCGCATCGGTCGTGA 1443 0.4775 MGLGTISLCLPFLFSAFVLLSSYVRNAVAEELLPSNRKALEVIIGGGGGGNSGYAPAPFPECECQEPPPSPPPPQPSCPPPPSPPPPVCPPPTSPPPPPPKPPTVNRVERARRVLLKFKLNINDPKGYTRNWNETNDPCHFNGIRCAEYPNSKQQAVAGIDLNGAGISGKGKDLTLSGILDKIPDLTFFHVNSNKFSGAIPNEIVKYLYFFELDLSNNKMVGQFPKEVLQSKRLVFLDLRFNQLQGPVPPELFQLDLDVIFINNNQFSQNLPDNFGSTRARFLTFANNKLTGPIPRSIGKASKTLTEVLFLGNYFSGCLPYEIGYLKKARVFDVSRNWLTGPIPNSFACLENIQFLNLTDNQFYGTIPEMVCQLPKLRNNGNLSLSGNYFTQVGPECRKLIMSNVLDVKKNCILGLPNQRPEAQCTDFFSKVKPCPDQKALNLVPCKKYYSSSQRTTLDPETSASPPAPVTYKSLNPHRS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1881 480 Gene3D Ribonuclease Inhibitor 108 279 IPR032675 -
Glsi03g1881 480 MobiDBLite consensus disorder prediction 455 470 - -
Glsi03g1881 480 MobiDBLite consensus disorder prediction 57 105 - -
Glsi03g1881 480 Pfam Leucine rich repeat N-terminal domain 111 146 IPR013210 -
Glsi03g1881 480 MobiDBLite consensus disorder prediction 455 480 - -
Glsi03g1881 480 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 106 463 - -
Glsi03g1881 480 Gene3D Ribonuclease Inhibitor 280 443 IPR032675 -
Glsi03g1881 480 SUPERFAMILY L domain-like 111 416 - -
Glsi03g1881 480 MobiDBLite consensus disorder prediction 61 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1881 Glsi-ChrGlsi03 80476223 80477665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1881 107 435 Trihelix Transcription Factor Family AT1G12040 40.663 2.74e-74 246