Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1878 ATGGCAATCCACCATCACAATGAACAACTAGAACACCACGAAAATTCTTCGTCTTTCCTGGATACTCTGTACTGTGACGAAGGAAAATGGGAGGAGGAAGATGAAGAAGAAGTAGGAGAGTTATCAGATGAAACTCATGTCACAAACGGTGAAGGGAATAGCACTTGTCTGTTTCCTTGGCTCTTGTTGGAGCAAGATTTGTTCTGGGAAGATGAAGAACTGAACTCTCTCTTCTCCAAAGAACAGAAACAACAAGAAGAAGCTTATTTTAATCTGCGTAATGTGGGTTTAGACTCTTCTCTCTCCGTGGCTCGTCGTGAGGCTATAGAATGGATGCTTAAAGTCAATGCCCATCATGGGTTCTCTGTTCTCACTGCAACACTATCCATTAACTATCTGGACAGGTTTCTTTCAAACTTCCATTTTCAAAGTGAGAAGCCATGGATGATACAGCTTGTAGCTGTCACTTGCTTCTCGTTGGCAGCAAAAGTTGAAGAGACTCAAGTGCCTCTTCTTCTAGACCTCCAAGCGGAAGACACAAAGTATTTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGTTGGTGCTCTCCACCCTTAAATGGAAGATGCACCCAGTCACCCCACTCTCGTTTCTAGATCACATCATAAGGAGGCTTGGATTGAAAACCCATCTTCACTGGGAATTCCTCAGGCGCTGTGAGCATCTTCTACTCTCTGTTCTTTCAGATTCAAGATTTGTTGGTTATCTTCCTTCGGTGTTGGCCACTGCGACAATGCTGCATGTCGTAGACCAGATTGAGCAAAGTGATGGAGCGGAATATAAAAACCAGCTTCTGGGTGTTCTTAAAATTAGCAAGGAGAAAGTAGAGGAGTGTTATAATGCAATTCTGGAGCTCTCAAATGCCAATAATTATGGGCTTAACAACCCACGGAAGCGCAAGTATGACCAAATCCCTGGCAGCCCAAGTGGCGTAATTGATGCTGTTTTTAGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTTATCACCAGAGCCTCTGTTCAAGAAGAGTAGACCCCAAGAACAACAACAAATGAAATTGTCACCACTCAACCAGGTCATTGTCGGAATCGTTGGCTCTTCTCCTTAA 1149 0.4378 MAIHHHNEQLEHHENSSSFLDTLYCDEGKWEEEDEEEVGELSDETHVTNGEGNSTCLFPWLLLEQDLFWEDEELNSLFSKEQKQQEEAYFNLRNVGLDSSLSVARREAIEWMLKVNAHHGFSVLTATLSINYLDRFLSNFHFQSEKPWMIQLVAVTCFSLAAKVEETQVPLLLDLQAEDTKYLFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLSDSRFVGYLPSVLATATMLHVVDQIEQSDGAEYKNQLLGVLKISKEKVEECYNAILELSNANNYGLNNPRKRKYDQIPGSPSGVIDAVFSSDGSNDSWAVGSSLYLSPEPLFKKSRPQEQQQMKLSPLNQVIVGIVGSSP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1878 382 Pfam Cyclin, C-terminal domain 207 317 IPR004367 -
Glsi03g1878 382 FunFam D6-type cyclin 86 205 - -
Glsi03g1878 382 SMART Cyclin_C_2 207 325 IPR004367 -
Glsi03g1878 382 CDD CYCLIN_AtCycD-like_rpt2 207 297 - -
Glsi03g1878 382 FunFam CYCLIN D32 206 295 - -
Glsi03g1878 382 ProSitePatterns Cyclins signature. 105 136 IPR006671 -
Glsi03g1878 382 SUPERFAMILY Cyclin-like 68 205 IPR036915 -
Glsi03g1878 382 SMART cyclin_7 110 198 IPR013763 -
Glsi03g1878 382 PANTHER CYCLINS 71 299 IPR039361 -
Glsi03g1878 382 Gene3D - 77 297 - -
Glsi03g1878 382 CDD CYCLIN_AtCycD-like_rpt1 104 202 - -
Glsi03g1878 382 SUPERFAMILY Cyclin-like 208 316 IPR036915 -
Glsi03g1878 382 Pfam Cyclin, N-terminal domain 99 204 IPR006671 -
Glsi03g1878 382 Gene3D - 87 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1878 Glsi-ChrGlsi03 80445654 80447133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1878 1 315 Core Cell Cycle Gene Families AT4G34160 54.180 2.10e-115 339