Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1867 ATGACCATTGTCGAGATAATTGATGCTCATCAAGGTTTTAAGTTGGTTACTGACAAAATAACAACTCGAAAGCCACGCCTTCTCCTTTGGGTGATTGGGATTGTCACATTTTTTCTCAGTTCAGTTCTAGACAACCTGACAACTACTATAGTCATGGTTTCTCTGTTGCGGAAACTAGTCCCTCCATCAGAGTATCGAAAAATTCTTGGAGCTGTTGTTGTTATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACTACTATGCTGTGGATACATGGTCAAATATCCACTTTGCCAACAATGAAGGGTTTGTTTGTACCTTCAGCTATTTCTCTAGCTGTCCCTCTAGCCCTCATGTCCCTGACTAGTGAAGTTAATGGGAACGAACTAGATTCTCCCAATATCTTGGCATCTGACCAGATGGCTCCTCGAGGGCAGCTTGTTTTCTCTGTGGGTCTAGGAGCTTTGATTTTTGTGCCAGTGTTCAAGGCCCTTACAGGATTACCTCCTTACATGGGTATATTGCTTGGACTTGGTGTGCTTTGGATCCTCACTGATGCCATACATGGTAAATCTGAACGAGACAAGCTAAGAGTACCACATGCCTTGTCAGAGATAGACATTCAAGGAGCACTATTCTTCCTCGGAATTCTATTATCTGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGGGAAATAGCAAATTACCTTGATGCTCATATTCCAAATGCTGATTTGATTGCAAGTGCTATTGGAGTCATGTCTGCAGTACTAGACAACGTTCCATTAGTTGCAGCAACAATTGGAATGTATGATCTCTCCTCTGTCCCTCAGGATTCTGAGTTTTGGCAATTGATTGCGCTTTGTGCCGGTACTGGTGGATCCATGTTAGTTATTGGCTCGCCTGCTGGAGTTGCATTGATGGGGAGGGAAAACGTGGACTTCTTTTGGTACTTAAAGAAGATTAGTGGCTTTGCTTTGGCAGGTTATGCTGCTGGTATTGCTGCATATTTAGCAGTTAATAACCTCCACATCTCCTTACCTACAGCTCTAGCTGAGGTTCCTTTTCTTTCTGTGAAGCATTACCAAAATTACAAACAAAAGAAAATAGGAGACTTGAATGAGCAACAATTGGATAAACCACTGTTGATTCTTGTGACAAAACACAAAACTACAACATTAACTGCAAAACTTGAATTATTCTTTTCCGCCCCTCTCTAA 1236 0.4248 MTIVEIIDAHQGFKLVTDKITTRKPRLLLWVIGIVTFFLSSVLDNLTTTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLFVPSAISLAVPLALMSLTSEVNGNELDSPNILASDQMAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHGKSERDKLRVPHALSEIDIQGALFFLGILLSVSSLEAAGILREIANYLDAHIPNADLIASAIGVMSAVLDNVPLVAATIGMYDLSSVPQDSEFWQLIALCAGTGGSMLVIGSPAGVALMGRENVDFFWYLKKISGFALAGYAAGIAAYLAVNNLHISLPTALAEVPFLSVKHYQNYKQKKIGDLNEQQLDKPLLILVTKHKTTTLTAKLELFFSAPL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1867 411 Coils Coil 411 411 - -
Glsi03g1867 411 Pfam Citrate transporter 1 296 IPR004680 GO:0016020|GO:0055085
Glsi03g1867 411 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 363 IPR045016 GO:0006814|GO:0015297
Glsi03g1867 411 NCBIfam sodium:proton antiporter NhaD 26 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1867 Glsi-ChrGlsi03 80369277 80376908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1867 1 363 Antiporters AT3G19490 83.242 0.0 596