Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi03g1864 ATGAACCTTCACTCCAAGAACCTCCATTTGTGGTGGAGAGTTTCATTCTTTCTTCTTCTACTACTTCGGTCATTTGCTCTGAACTCTGATGGGGTTCTCTTGCTTTCCTTTAAGTATTCCATCCTCAGTGACCCATTATCAGTCCTAGCGAGTTGGAACTATGGCGATGAAACACCATGTTCATGGAATGGAGTTACCTGCACCGAAGTTGGAAACCCAGGTATGCCTCACACGTTTAGGGTAACTAGCTTGGTCCTTCCCAATAGCCAGCTTCTGGGTTCGATCGCTGAAGACCTTGGCATGGTCCAACACCTTCGTCATCTTGATCTCTCTAACAATTTCCTTAATGGGTCTCTACCCAATTCAATCTTCAACGCTTCTGAGCTTCAAGTGCTTTCTCTCGCCAACAATGTCATCTCAGGTGAGCTACCTGAGAAAATAAGTGAACTGAAAAGTCTTCAACTTCTCAACCTATCTGACAATGCCTTTGCTGGGTCGGTCCCGGAAAGTCTCACTGGTTTGAAAAATCTGGCTGTTGTTTCTTTGAGGAGTAATTATTTTTCCGGCAGAGTTCCAAGTGGGTTCAACTCAGTGGAAGTCTTAGATCTGTCTTCGAATTTGCTTAATGGTTCTCTGCCAAATGACTTTGGTGGTGATAGCTTGCACTACTTGAACCTCGCTTACAATAAGATTTCAGGAACAATCCCACTAGAATTTGCCAAACAGGTACCTGGAAACTCTACAATTGATCTGTCGTTCAACAATCTTACAGGGCCAATACCACAATCTCTGGCTTTGCTTAGCCAGAAAACAGAGTTACTATCTGGGAATGATGATCTCTGTGGGAAGCCTCTGAAGATCCTCTGCTCCGTTCCTTCTACTTTGTCAACTCCACCTAATGTCACTACTACATCGTCACCTGCAATTGCAGCCATACCAAAAACAATTGACACAAGCCCAGGAACAAACACAACAGGAAGGCCCAATGGGACTCGGAATGGGTCACCCACTGGCCTAAAACCGGCCACCATAGCAGGAATCGTCGTCGGAGACTTGGCCGGAATAGGTGTCCTGGCCATGGTCATTCTTTTACTGTACCAACATCGAAAGAGAAGAGACCCGAGACCGACCACAAACGCAGCCAACTTGGAGAAGAAGCAGGAAACTGTAGCAAAACAAGACCCAGATGTTAGAACGTCCACACTTCCTTGCTCCTGCTTGACAATAAAGGAAAAAGAGACCTCAGAAGCAACGAGCTCCGACAGTGATGACCAGGAGAAAGCTGAAATTGACATCAGAAGCCAAAACGGGTATCTTGTAACAGTGGACGGAGAGACGAGACTCGAGCTTGAGACTTTGCTTACGGCGTCAGCTTATATTCTGGGAACGAGCCGGGCAAGCATCGTATATCGGGCAGTACTTGAGGATGGGAGAGCTTTTGCTGTTAGAAGGATTGGTGAATGTGGTATTGAGAGGAAGAAGGATTTTGAGAACCAAGTGAAGGCCATTGCTAAGCTTCGTCATCCCAATTTGGTTAAGGTTCGTGGATTTTGCTGGGGAGAGGTCGAGAAGCTTGTAATATGTGACTTTGTTCCCAATGGCAGCCTCGCTAGCATATGTTACAGAAGAACAGGGTCATCGTCTTTTAACTTGCCCTTGGAAGTGCGGCTCAAGATTGCAAAAGGGGTAGCACGAGGCTTGGCTTTTATCCATGAGAAGAAACACGTACATGGCAACATTAAACCCAGCAACATCCTATTAAACTCTGAAATGGAACCCATAATCGGCGATATAGGGATTGACCGGCTCCTATGCAACATCAACCAGAGAGGAAACGGTTCAGCTCGGCAATTGGTGAACCAAAGAAGCCAACAAGACTTCCCTGTAGGTGCAAGCCCCCATACACCAATGGGTTCATCTAGTGGGGTCCAATTGCCCTATCAAGCACCAGAGTGGATGCAAAACATCAAACCCAACCCAAAGTGCGATGTTTATTCATTTGGCATTGTCTTGCTGGAGCTTCTCAGCGGGAGAGTTGTCTCATACCTGGAATTAGACCAGTGGCCTGCAAATGATTCGGTGGCGGAGGACAGAAACAGGGTAATGAGGATGGCTGACGTGGGCATAAGATCTGAGGCGGAAGGCAGGGAAGATGCCATCTTGGCGTGCTTTAAGTTGGGGTTTAGTTGTGCCTCTGTTGTCCCACAGAAGAGACCGTCCATGAAAGAGGCTTTGCAGATCCTAGAGAAGATCCCTGCTTGCGACTAA 2268 0.4687 MNLHSKNLHLWWRVSFFLLLLLRSFALNSDGVLLLSFKYSILSDPLSVLASWNYGDETPCSWNGVTCTEVGNPGMPHTFRVTSLVLPNSQLLGSIAEDLGMVQHLRHLDLSNNFLNGSLPNSIFNASELQVLSLANNVISGELPEKISELKSLQLLNLSDNAFAGSVPESLTGLKNLAVVSLRSNYFSGRVPSGFNSVEVLDLSSNLLNGSLPNDFGGDSLHYLNLAYNKISGTIPLEFAKQVPGNSTIDLSFNNLTGPIPQSLALLSQKTELLSGNDDLCGKPLKILCSVPSTLSTPPNVTTTSSPAIAAIPKTIDTSPGTNTTGRPNGTRNGSPTGLKPATIAGIVVGDLAGIGVLAMVILLLYQHRKRRDPRPTTNAANLEKKQETVAKQDPDVRTSTLPCSCLTIKEKETSEATSSDSDDQEKAEIDIRSQNGYLVTVDGETRLELETLLTASAYILGTSRASIVYRAVLEDGRAFAVRRIGECGIERKKDFENQVKAIAKLRHPNLVKVRGFCWGEVEKLVICDFVPNGSLASICYRRTGSSSFNLPLEVRLKIAKGVARGLAFIHEKKHVHGNIKPSNILLNSEMEPIIGDIGIDRLLCNINQRGNGSARQLVNQRSQQDFPVGASPHTPMGSSSGVQLPYQAPEWMQNIKPNPKCDVYSFGIVLLELLSGRVVSYLELDQWPANDSVAEDRNRVMRMADVGIRSEAEGREDAILACFKLGFSCASVVPQKRPSMKEALQILEKIPACD 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi03g1864 755 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 197 - -
Glsi03g1864 755 Pfam Protein kinase domain 460 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1864 755 SUPERFAMILY L domain-like 28 287 - -
Glsi03g1864 755 ProSiteProfiles Protein kinase domain profile. 455 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi03g1864 755 Gene3D Ribonuclease Inhibitor 27 195 IPR032675 -
Glsi03g1864 755 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Glsi03g1864 755 Gene3D Ribonuclease Inhibitor 196 291 IPR032675 -
Glsi03g1864 755 MobiDBLite consensus disorder prediction 373 397 - -
Glsi03g1864 755 MobiDBLite consensus disorder prediction 313 337 - -
Glsi03g1864 755 SUPERFAMILY Protein kinase-like (PK-like) 460 749 IPR011009 -
Glsi03g1864 755 Gene3D Transferase(Phosphotransferase) domain 1 531 754 - -
Glsi03g1864 755 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Glsi03g1864 755 Pfam Leucine Rich Repeat 104 123 IPR001611 GO:0005515
Glsi03g1864 755 Gene3D Phosphorylase Kinase; domain 1 415 530 - -
Glsi03g1864 755 FunFam Leucine-rich repeat receptor-like protein kinase 198 291 - -
Glsi03g1864 755 SMART LRR_typ_2 195 218 IPR003591 -
Glsi03g1864 755 SMART LRR_typ_2 150 173 IPR003591 -
Glsi03g1864 755 SMART LRR_typ_2 102 126 IPR003591 -
Glsi03g1864 755 ProSiteProfiles Leucine-rich repeat profile. 104 126 IPR001611 GO:0005515
Glsi03g1864 755 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi03g1864 Glsi-ChrGlsi03 80359183 80361531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi03g1864 26 751 Receptor kinase-like Gene Family AT2G15300 51.383 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi03g1864 Pkinase 3.1e-28 CL0016